Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0662 ATGGTGGCGAATCCTACAAAAACCCCTCATAACAACGTTGTTGATGAACAACACAACACAGTTTTATTGCCTGGCATGGATAGGGACAGAGAGATGTCTACTATGATCTCTGCTTTGGCCCATGTCGTCGCCGGAGATATCCCCGGTGGTTCCACTGATGTTTCTGGCGGCGGCGGCGGCTCTATTTCATTAAACTCGCCTTCGGATTCGACTACGACGGCGCCGTCTTCGTGTTCTTCATCTTACAGTGGTAGCTCTGTTTTGAAGCGAAGTAGGGAAGATAATATTAGAGGCTCTTCTTCTTCTTCCTCTTCTTCTTCCACTGCTATTATTCAAACAGTTGCATCAGAAGGCTCAAGAGGAGAACTAGTTCAAATGTATGAATATAGTTGCAACACAGAGAATGTGAGAGGTACAGAAGAAGGAAGAAGAAAGTACAGAGGAGTGAGACAGAGGCCATGGGGCAAATGGGCAGCTGAAATCAGAGATCCTTTCAAAGCTGCCCGTGTTTGGCTGGGCACTTTCGACACGGCGGAGGCCGCTGCCCGGGCTTACGACGAAGCTGCCCTCCGTTTCAGAGGCAACAAAGCAAAGCTCAACTTCCCGGAAAATGTCAGACTCCGGCAACCGCCTCCGCCGTCTCCGGCGACTACCCTTTTGTCCGTTCCGACGTCCACCGAGCCGATTGTCCATACCGAACCGATTCGCCGGCATCCTCTCATGAGCTCTCAGTCGCCGGCGCCGGCGCCGGCTCCGGCTGCCGGAGATTTTTATGGGTACCCGCAGTTTTCGGAGTTTCCGATGAATTTTTATGATCAGATGGTTATGTCATCTTCGATGTCTCATCATTTAGAGTCGCCGGCATTGCCATCGTCGTCGCCGGCGGCGTTTAGCTCTCATCAGCAAGGAGATTTGCAGTTTCCGGGTTGGGTCATACCGGAAACGGGTCAGGAAAGCGGGTCGGATTATGTGCCATCAGCATGGTCATCTGGTTCGGGATATAGCGCTTCTTCGTCTATGTGA 1023 0.5171 MVANPTKTPHNNVVDEQHNTVLLPGMDRDREMSTMISALAHVVAGDIPGGSTDVSGGGGGSISLNSPSDSTTTAPSSCSSSYSGSSVLKRSREDNIRGSSSSSSSSSTAIIQTVASEGSRGELVQMYEYSCNTENVRGTEEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRQPPPPSPATTLLSVPTSTEPIVHTEPIRRHPLMSSQSPAPAPAPAAGDFYGYPQFSEFPMNFYDQMVMSSSMSHHLESPALPSSSPAAFSSHQQGDLQFPGWVIPETGQESGSDYVPSAWSSGSGYSASSSM 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0662 340 ProSiteProfiles AP2/ERF domain profile. 145 202 IPR001471 GO:0003700|GO:0006355
Mibi09g0662 340 PANTHER DNA-BINDING DOMAIN 91 277 IPR044808 GO:0003700|GO:0009873
Mibi09g0662 340 PRINTS Ethylene responsive element binding protein signature 168 184 IPR001471 GO:0003700|GO:0006355
Mibi09g0662 340 PRINTS Ethylene responsive element binding protein signature 146 157 IPR001471 GO:0003700|GO:0006355
Mibi09g0662 340 MobiDBLite consensus disorder prediction 56 89 - -
Mibi09g0662 340 MobiDBLite consensus disorder prediction 319 340 - -
Mibi09g0662 340 SMART rav1_2 145 208 IPR001471 GO:0003700|GO:0006355
Mibi09g0662 340 MobiDBLite consensus disorder prediction 50 109 - -
Mibi09g0662 340 CDD AP2 145 204 IPR001471 GO:0003700|GO:0006355
Mibi09g0662 340 Pfam AP2 domain 145 194 IPR001471 GO:0003700|GO:0006355
Mibi09g0662 340 SUPERFAMILY DNA-binding domain 145 203 IPR016177 GO:0003677
Mibi09g0662 340 FunFam Ethylene-responsive transcription factor 2 144 203 - -
Mibi09g0662 340 Gene3D AP2/ERF domain 144 204 IPR036955 GO:0003700|GO:0006355
Mibi09g0662 340 MobiDBLite consensus disorder prediction 306 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0662 Mibi-ChrMibi09 8587114 8589400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0662 143 218 AP2-EREBP Transcription Factor Family AT2G33710 75.641 7.73e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi09g0662 AP2 4.1e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0662 09 8587114 8589400 Mibi09g0662 09 8587114 8589400 ECH