Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0650 ATGGATTTAGACGATTTCCGATCAATTTTGGAAACTGCCGGTGTGGATGTATGGATGTTTATCGATACTGCAATTGATGTTGCTTCCATTGAGTTCAACGGCGAATTAAAGCGTCGGAGAGACGGAATCGTTCAGCGTCTGTACGAAGCCACAAGTTCAGCTTCTTTGGGACGGTGTAGGAATTGCGAAGCGATTAGGCTTAAGTCCAATGGCCACGAAATTAGCTCTCCGATTCAGAAACAGAGCACTCCTGAACTGAAAACTGATGCCTCGCCGTCGCCGGCGATTGGTCAAGATGACGGTGATTTAGACCCTTACGGTGGCCTTCTTGATGATGAGCAAATCAAGATTCAAGAAATTAAAGAGCAACTTGAGGATCTTGATCAGTCTGAAGATTATGTGGTGGAGTTGTTACAGAATCTAGCGGACATGGATATTACATTCCAAGCGCTAAAGGAGACTGATATTGGGAGGCACGTTAATCGGTTGCGCAAGCATCCATCGAATGATGTTCGGAGATTGGTGAAGCTACTTGTCAGGAAATGGAAGGAGATTGTAGATGAATGGGTGAAGGTAAATCAACCGGGCGATATTGCTTCTGTCATTGCTAATGGAGATTCGCCTGTACAGAAAAACACCCAGAACGGGCACAGTCAGATTCCTGATTTTGCATACTCGCCTAATACACACTATGGGAGTTCTGGATCAGAGCGGAACTATTCAGAAGCTGAACCAAAACCAAAGACAGTTTCTCGAAGAGCGCCACCGCCTATTCCTGCTTCTGATCCTCTAAACAGAAAGAGAGAACAGAGAGATAGCAATTTTGAAGCGGACAGACTTGCTTCGGCAAGAAGGCGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGCCAAAAGACAAAGAACAATCCAGGTGATGGACCTCCATGAGATCCCTAGACCCAAGAAAAATGCCTTCTTTCCAAAGAACAAAGGTGGTGGCGGTTCTCAGGGTAGACACTGGTAA 1005 0.4557 MDLDDFRSILETAGVDVWMFIDTAIDVASIEFNGELKRRRDGIVQRLYEATSSASLGRCRNCEAIRLKSNGHEISSPIQKQSTPELKTDASPSPAIGQDDGDLDPYGGLLDDEQIKIQEIKEQLEDLDQSEDYVVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKVNQPGDIASVIANGDSPVQKNTQNGHSQIPDFAYSPNTHYGSSGSERNYSEAEPKPKTVSRRAPPPIPASDPLNRKREQRDSNFEADRLASARRRLQENYKEAENAKRQRTIQVMDLHEIPRPKKNAFFPKNKGGGGSQGRHW 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0650 334 ProSiteProfiles TFIIS N-terminal domain profile. 112 189 IPR017923 -
Mibi09g0650 334 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 111 197 IPR035441 -
Mibi09g0650 334 MobiDBLite consensus disorder prediction 203 334 - -
Mibi09g0650 334 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 334 IPR044790 -
Mibi09g0650 334 MobiDBLite consensus disorder prediction 73 100 - -
Mibi09g0650 334 MobiDBLite consensus disorder prediction 264 317 - -
Mibi09g0650 334 Coils Coil 110 130 - -
Mibi09g0650 334 Coils Coil 277 304 - -
Mibi09g0650 334 CDD TFIIS_I 117 187 - -
Mibi09g0650 334 MobiDBLite consensus disorder prediction 205 240 - -
Mibi09g0650 334 MobiDBLite consensus disorder prediction 73 89 - -
Mibi09g0650 334 Pfam TFIIS helical bundle-like domain 137 186 IPR017923 -
Mibi09g0650 334 SMART TFS2_5 117 188 IPR003617 GO:0005634
Mibi09g0650 334 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 117 194 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0650 Mibi-ChrMibi09 8425800 8427796 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mibi09g0650 Med26 1.3e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0650 09 8425800 8427796 Mibi09g0650 09 8425800 8427796 ECH