Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0649 ATGATCAAACTTCTCTTCCTTAAAAATGTCACCTTTTTATCATCTTTTTCTTCTTCCTCGCAATTAGCTCGACCCCTTTTTCTCCAAATTTGTCACTTCTCAGCTTCTTCATATAACCATTCATTCTTGAGGCTCCGTGATGATGAAACGCGAAATGATCGAAATGTGCCAGTTTCAGTGTGGTGGGAGATTGATAGTTGTTATTTACCTGCTGATGTTAATGGTTATAGAATCACACGCTGTATTGCAGAAGCTCTTAGGGCTAAAGGGATAAAGGGGCCGCTTCAAATTAAGGCTTTTGGTGATGTCTTGCGGCTCTCACATGCCAATCAGGAAGCTCTCTCTTCCACTGGGATTAATCTGGTCCACATTCCCTATGGTTCGTCTTGTAATCCTGTTTCTTTGCTATTTCGAACTGTAAGGTCCCTATCTATCCTAGTTTGTGAAAAAAATCCTGCTCATGGGTCTCTTCTTGTTGATCTTATGCATTGGGTTTCTAACAATCCTCCACCCGCGCATCTGTTTTTGATTACTGATAATAGGGTTTTTGCTGATATGTTACACCGTTTAAGATTGGATAACTACAACATTTTGCTAGCTACACCAGCAAGGGCTCCTAATATTCTCTTTAATGCAGCTACTATAATGTGGCATTGGAATTCACTAATTAGAGGAGAAAATCTTGATGGAAAACACTTTAATCATCCTCCTGACGGTTGGGATGGTTCTTGGTATGCGCACCAAAAGGTGCCTCTTGAAGATCCTTTCTCGGATGGTGAGCAGTCACAGATTGAGGAGATATCTGCGCCTGCCTCAGATTCGGAACTGCCTACGGTTGTGAGGCAAGTTCGGGAAATATTGAACTCATACCCAACAGGTATCCCTGTATCAGACCTTCGAGCAGAGATAGCAAAAGCTGGTATTTTCTTGGATAAGGACTACTATGGGCACAAAAAGTTTTCCCGCTTTCTCTTGTCAGTAGCAAATGTACAACTTAGGCCTAGACCTGATAAAGTACTCTCTGTTTATCCCAGCCCCCAAAAATGTCCTGGACACTTTGATAACAGTTCTGTATCATCAGCAGTATCTGTATATGGTGAGGAGTTGAACCAGGAGGGTACCTCAAAGTCAAGTGATGAGGTCAAAAAGGTGGTCGGGACTGCAGAAATGAAACCATCAATGGTTTCATCTCAGGTCCCAGAAAAGGTCCAACAGGCTGTTGATGTGGGTAATGCACATGTAACTGAGAGTCAATGGCCTCTGAAGGAGAATGAAATTCTTAGCTCTAGTGATGCAAGTCTGAGTGTCACAGAGAAAAATACAACTTCGGAAAATTACTGTACTGAACAAAGCGACACAGTTTCAGACAAGAATATCTCCTTAAATGATATTTCTAGAGAGTTAAAAGTTGAGGAGAAGTGTGACAAACCCACGAGAAAGGAAGCTGATGAAGTTTGTCACATTCCTAATTCTTTACCAGTTGATGAATCTGTGATTGACAAAAGCATTGGTGAAAGCACTGAACCTCACAGCAAAAATTTTGGGAAACGTCCAGGTTTCTTTGCTTGGATTAGCAGCTGGTGGCCATTTAGGAAAAATGGTAGAAAATCAAATAATTTGACTGATCAATCGAAAGAAATGCTTAGTAATACTGAAGAGCCCAAGGTTTCAAACCCGAACCAGGCAACCTCTCGTTCTGAAGAGTCCGACCCATCAGATCTTAAACAAACAGTTTCTCATTCTGAAGAGTCTGAGTTCACAGAACAGAAACAAACAGTTAGTCACTCTGAGAAGCCTGGGTTATCTGAATCGAGACAGACAGTGAATTGTTTTGTAGAGCCTGAGTTATTTTCTAGTAGTTCCTTTTGGAGTGACATGGAATCTTTCGTTTTTTCTGGCAAAGGATCAACTCTAATCTCCCGTTCTAAAAGCAGGAAGGATCTGATGCTGAAATTTCAGAAGTTTGGACCCCAGATTCTCAGTTCTCTTGGTGAATATGACCTCCTTCAACTGGGGGATATGTTGATATCTAAGAAAAAATGGTTGGAGGAAAGGCCTTCTCTGACTTTTCCTTTCCTGGTCGCTGAACAAGCTGGGAAGAACTCTGTGGGCCTATCACATGGTGCAACTGGCTTGAGATCTCTTTTTCTAGGCAAAGAAGCACGGAGCACATTGCAAAAATCATCGGAAGGTGATGTCGATAAAAGATATCTGAGTATTCCTCACACCGGAGTTTCTTCACCTGCCATTAAAAATAAGCACACTGAAAGGTCTAGAACTGGCACATTAGCTGATGTTCAGAAACTTGTCAGTGACATATTGAAGGAGCATTCAGATGGGTATAACATGGGTTTGATACCAAAACTTTTTCTGGAGAGGTATGGTTATCCTCTTGATGTTCAGAAGCTTGGTTATCTAAAATTGGCAACCTTGTTACAGATTCTGCCTGGAGTAAAAGTAGAGTCTAATTTCATCTTTCCTGCTAATCATCCCGCATTTGCTTCTGACATGGAAATGTCAACTCTCAATACTTTAGCCAACAATTCAAGTGGTGCAGTGTCGGATCTGGATAGAGAGTCATCTGATTCACACCATAAAGATGATCACAAGGACACTCCTTGGGAAGAATTAGGACCTATCTCGATCAGCAATCCCGAACAGAGTGGCCTGGAAACAAAATCAAGGCAAGAGGCTCTAAAGCTGGAGACCACAATACATCCTGAATATGAACCTTCACTTTCTGATGATGATTCTTCTGAATCCGAAGGAGATAACTGTCATTTAACTCGATCAGAAGAGGAAGGACGGTTGAAACATAATGTGGATGATAGTTCTCTTTTGCAAACTCTGGAGTCGTTTTACAGAAGCCGAGAAGAGGACAGTGTGAAGTCAGAAAATACTGAAACCAAAAGCAATGGTTTGACTGGTGGTTTACATCTATCCAGGCATTCTACACCAGAAGTACTTTCCAAAATTCAAGAAAAGCAAAGACCTCACAAGAGCTATTCATTTGTTGCTGACTCAGACTCACGAAAGAAGGACGAGCTCATTGATGGAATATTACAAAATTTGAGGAAATCAGATGAGTTGCGGATGCGAAATTGA 3105 0.4138 MIKLLFLKNVTFLSSFSSSSQLARPLFLQICHFSASSYNHSFLRLRDDETRNDRNVPVSVWWEIDSCYLPADVNGYRITRCIAEALRAKGIKGPLQIKAFGDVLRLSHANQEALSSTGINLVHIPYGSSCNPVSLLFRTVRSLSILVCEKNPAHGSLLVDLMHWVSNNPPPAHLFLITDNRVFADMLHRLRLDNYNILLATPARAPNILFNAATIMWHWNSLIRGENLDGKHFNHPPDGWDGSWYAHQKVPLEDPFSDGEQSQIEEISAPASDSELPTVVRQVREILNSYPTGIPVSDLRAEIAKAGIFLDKDYYGHKKFSRFLLSVANVQLRPRPDKVLSVYPSPQKCPGHFDNSSVSSAVSVYGEELNQEGTSKSSDEVKKVVGTAEMKPSMVSSQVPEKVQQAVDVGNAHVTESQWPLKENEILSSSDASLSVTEKNTTSENYCTEQSDTVSDKNISLNDISRELKVEEKCDKPTRKEADEVCHIPNSLPVDESVIDKSIGESTEPHSKNFGKRPGFFAWISSWWPFRKNGRKSNNLTDQSKEMLSNTEEPKVSNPNQATSRSEESDPSDLKQTVSHSEESEFTEQKQTVSHSEKPGLSESRQTVNCFVEPELFSSSSFWSDMESFVFSGKGSTLISRSKSRKDLMLKFQKFGPQILSSLGEYDLLQLGDMLISKKKWLEERPSLTFPFLVAEQAGKNSVGLSHGATGLRSLFLGKEARSTLQKSSEGDVDKRYLSIPHTGVSSPAIKNKHTERSRTGTLADVQKLVSDILKEHSDGYNMGLIPKLFLERYGYPLDVQKLGYLKLATLLQILPGVKVESNFIFPANHPAFASDMEMSTLNTLANNSSGAVSDLDRESSDSHHKDDHKDTPWEELGPISISNPEQSGLETKSRQEALKLETTIHPEYEPSLSDDDSSESEGDNCHLTRSEEEGRLKHNVDDSSLLQTLESFYRSREEDSVKSENTETKSNGLTGGLHLSRHSTPEVLSKIQEKQRPHKSYSFVADSDSRKKDELIDGILQNLRKSDELRMRN 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0649 1034 ProSiteProfiles OST-type HTH domain profile. 275 346 IPR025605 -
Mibi09g0649 1034 Pfam NYN domain 58 213 IPR021139 GO:0004540
Mibi09g0649 1034 CDD PIN_limkain_b1_N_like 57 202 - -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 920 941 - -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 848 943 - -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 536 605 - -
Mibi09g0649 1034 CDD LOTUS 763 820 - -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 988 1010 - -
Mibi09g0649 1034 PANTHER LIMKAIN B LKAP 51 721 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 893 913 - -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 956 1010 - -
Mibi09g0649 1034 Pfam OST-HTH/LOTUS domain 276 339 IPR025605 -
Mibi09g0649 1034 Pfam OST-HTH/LOTUS domain 763 822 IPR025605 -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 568 592 - -
Mibi09g0649 1034 Gene3D - 762 826 IPR041966 -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 536 567 - -
Mibi09g0649 1034 MobiDBLite consensus disorder prediction 857 875 - -
Mibi09g0649 1034 ProSiteProfiles OST-type HTH domain profile. 762 836 IPR025605 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0649 Mibi-ChrMibi09 8407458 8411135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0649 58 225 C2H2 Transcription Factor Family AT5G61190 36.310 4.95e-27 117