Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0648 ATGGTTAGACACTCGCTTTCCAAAAATATCTTCTTTTTCTCATCCATTTCTTCTTCTTCTTCTTCTTCATCTTCAGTTCGTGCTCTTCTCTCCCAAATTTGTCACTGTTCTAGCTCGTTGAATAGCCCCTCATTACTCAGACGCCATTATCATGAATCCCAAAATATCCCTGTCTCAGTTTGGTGGGATTTTGAGAATTGCCATGCACCTTCTGATCTTCATATTCTCAGAATTCCTCACTACATAAAGGAGGCAGTTCGAGCCAAAGGGATCTTTGGGCCTCTTAAAATTAAGGCTTTTGGTGATGTTTATAAGCTCTCAAGGTCCAACCAGGAGGCTCTTGCGCACACTGGGATCAAAATGATCCACGTTCCTCAAGGTGGAAAGAATAGTGCTGATAAGTCTCTTCTTATTGACCTTATGTTCTGGGTTTCCCAAAATCCTCCTCCTGCGCATTTGCTTCTAATTTCAAGTGATAAGGATTTTGCTGAAGTATTACATCGTTTGAGAATGAATAACTACAATATCCTGGTTGCTGGTACAGAGACTTCTTATCTTCTTTGCAATGTAGCAACTATAGTGTGGCGCTGGTATTCGTTATGTAGAGGAGAAAATCTTGAGGGAGTGCACTTCAACCATCCTCCTGATGGTTTCTATGGTTCTTGGTGTGGTCACCATGATGCACCTCTTGAAGACGCTTCCTCGGATGGAAAACAATTTGCACATTCAGAAACTGAGGAATTCCCTAAACCCATATCAGGTTTGAAGGTGCGCCCGATTCCAAAGGCAGTTGTGGGGCGGCTTCATCAGATATTGAATTTGTATCCAAACGGTATCACTTTATCACATCTTAGAAAAGAGTTAGAAAAAGCTGGTATATGCTTGGATAAAGATTACTATGGATATAAAAGGTTTCCCTACTTTCTTTCATCAGTGGTACATGTATATCTTCAGGCTATACCTGATAGAGGACTTATTGTTTATTACATCCCCAAAGAATCTCCAGAATCAGATAATACTTCTGAAAGGTTAAATGCTGATGACAAATATGCTGAGGCGACAAATAAGGAACCTGATGGAGGTTGTCTCATTGGTGGAAGCATGGATCCTCACAGCAATAATTTTAGTAAACCTCAAACTTTCTTGAGTTGGATTAAAAGTTGGTGGCCATTCAGGAAAAAAGTTGGAAACACACATAATTTGGCTGCCCATAGGGATGAGATGGTTAGTAATGCTAACGAGCCTGAGCTATCAAATCTGGAACAGAGGGTTAGTCATTCTGAAGAGCTCCAGTCATTAAAACATAGGCAAACGGCTAGTCAATTTAATGAGCCTGAGTTATCAGAACCGAGACAGACAGTGAATCATTCTGGAGAGCAGAAGTTATTTTCTTATAGCTCCTTTTGGAAGGAAATGGAATCTTTTATTTTCGCCTCCAAAGGAGCAATTCTTGTCTTATACTCAAGAAGTAGGAAGGAGATGGCTTTCAGTTTTAAAAAGTATGGACCCCATGTTCTGCACTCTCTTAGTGAAAATGATCTCCTACTATTGGTGGATTTGTTAATATCTAAGAAAAAATGGTTGGAGGAAAGGCCTTCTCAGACTTATCCTTTCCGTGCCATTCCACGCAGAACACCAGAAAGTAACTTGCAAAAATCATTAGAATGTGAAGCTGATAAAAAACCAAGTATTCCTCATGCTGTGGTTTTTTCACCTGCCACTCAAAAAGCAGATGTTAAGAAACTTGTGCGTGAGATTTTGAGACAACACCCAGATGGGTGTAATATGGGTATGATACCGAAACTCTTTGTGGAGAAGTACGGCTATCAATTAGATATTGGGAAGCTTGGTTATTCTAAGTTATCACTCCTTATACAGAGTCTTCCTGGAGTGAGAACAGAGCTTGAACATTTCTTTCCTGCAAATCATGGAAAACGTGATTCTGGTAAAGAAACTTCAATTCTCAAAACTCAAGAGACAAAACTAAATGATGTAGTGCACCTCCATTCAGAGAATGAGTTCCATCCCCACCCTAAAGATGATCAGAAAGAATACCCATGGGAGGAATTAGGACCTGTTGCTGCCAGCAATTCCAATGAAACTGAGCTAAAATTAGAACCAAGGCAGGAAGCAATAGAGCTGAAGACTGCAATTGTTCCTGATTATGAACCTAATCTCTCTGATGACGATTTTCTGGAGTCTGCAGAAAATAACTCTTGTTTAACTCAATCAGAGTATGATCATTTCGTTCCTGCTGATCATGGCATATGTGATTCTGGTGAGGAAACTTCAATTCTCAAAACTGAAGAGACAAAACTAAATGATGTAGTGCACCTCCGTTCAGAGAATGAGTTCCATCCCCACTCTGAAGATGATCAGAAAGACTACCCATGGGAGGAATTAGGACCTGTTTCTGCCAGCAATTCCAATGAGACTGACCTGGAATTAGAACCAAGGCAGGAAGCAATAGAGCTGAAGACTGCAATTGATCCTGATTATGAACCTGATCTCTCTGATGACGATTTTCTGGAATCTGGAGAAGATAACTCCTGTTTAACTCAATCAGAGTATGGTCATTTCGTTCCTGCAGATCATGGCATATGTGATTCTGGTAAGGTAACTTCAATTCTCAAAACTCAAGAGACAAAACCAAATGATGTAGTGCACCACAATTCAGAGGATGATTTTTATGATTCATACTCTGAGGATGATCAGAAAAACTACCCATGGGAGGAATTAGGATCTGTTTCTGTCAGCAATCCCAACGAGAGTGACCTGGAGTCAAAACCAAGGCAGGAAGCAATAGAGCTGGAAACTGCAATAGATCCTGATTATGAACCTAATCTCTCTGATGATAATTCTTCTGAATCTGGGGGAGATAACTCCTGTTTAACTCAGCCAGAAGAGGAAGGTGAGCTCAAACTTAATGTGGAAGACAGTTCTTTGCAAAATCCGGACTCGACATATGGCCATCAAGAACGAGAGGATGGTGTGAATCCAAACAAGGCCAGTACAGAAGGCAATGGTCTGACTGATGGTTTAAATCCACCTAGGATTTTCATTCCGGCAACCATTTCTGGAAATCTTTCAGGGGGTTATAAAGAGAAGCACATGCCCAATCAAAAATGTTCATTTGATGCTGAACCAGCCTCACCCAAGAATAAGGAACTGATTGAAGGGATATTACAATGTTTGAAAGCCGCAGATGGCACGAAGATGCCAAATTGA 3228 0.4061 MVRHSLSKNIFFFSSISSSSSSSSSVRALLSQICHCSSSLNSPSLLRRHYHESQNIPVSVWWDFENCHAPSDLHILRIPHYIKEAVRAKGIFGPLKIKAFGDVYKLSRSNQEALAHTGIKMIHVPQGGKNSADKSLLIDLMFWVSQNPPPAHLLLISSDKDFAEVLHRLRMNNYNILVAGTETSYLLCNVATIVWRWYSLCRGENLEGVHFNHPPDGFYGSWCGHHDAPLEDASSDGKQFAHSETEEFPKPISGLKVRPIPKAVVGRLHQILNLYPNGITLSHLRKELEKAGICLDKDYYGYKRFPYFLSSVVHVYLQAIPDRGLIVYYIPKESPESDNTSERLNADDKYAEATNKEPDGGCLIGGSMDPHSNNFSKPQTFLSWIKSWWPFRKKVGNTHNLAAHRDEMVSNANEPELSNLEQRVSHSEELQSLKHRQTASQFNEPELSEPRQTVNHSGEQKLFSYSSFWKEMESFIFASKGAILVLYSRSRKEMAFSFKKYGPHVLHSLSENDLLLLVDLLISKKKWLEERPSQTYPFRAIPRRTPESNLQKSLECEADKKPSIPHAVVFSPATQKADVKKLVREILRQHPDGCNMGMIPKLFVEKYGYQLDIGKLGYSKLSLLIQSLPGVRTELEHFFPANHGKRDSGKETSILKTQETKLNDVVHLHSENEFHPHPKDDQKEYPWEELGPVAASNSNETELKLEPRQEAIELKTAIVPDYEPNLSDDDFLESAENNSCLTQSEYDHFVPADHGICDSGEETSILKTEETKLNDVVHLRSENEFHPHSEDDQKDYPWEELGPVSASNSNETDLELEPRQEAIELKTAIDPDYEPDLSDDDFLESGEDNSCLTQSEYGHFVPADHGICDSGKVTSILKTQETKPNDVVHHNSEDDFYDSYSEDDQKNYPWEELGSVSVSNPNESDLESKPRQEAIELETAIDPDYEPNLSDDNSSESGGDNSCLTQPEEEGELKLNVEDSSLQNPDSTYGHQEREDGVNPNKASTEGNGLTDGLNPPRIFIPATISGNLSGGYKEKHMPNQKCSFDAEPASPKNKELIEGILQCLKAADGTKMPN 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0648 1075 PANTHER LIMKAIN B LKAP 43 547 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 913 932 - -
Mibi09g0648 1075 ProSiteProfiles OST-type HTH domain profile. 575 651 IPR025605 -
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 784 798 - -
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 948 964 - -
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 884 907 - -
Mibi09g0648 1075 Pfam NYN domain 58 191 IPR021139 GO:0004540
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 827 850 - -
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 937 1016 - -
Mibi09g0648 1075 CDD LOTUS 577 631 - -
Mibi09g0648 1075 Gene3D - 50 197 - -
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 784 814 - -
Mibi09g0648 1075 Gene3D - 573 637 IPR041966 -
Mibi09g0648 1075 MobiDBLite consensus disorder prediction 436 455 - -
Mibi09g0648 1075 Pfam OST-HTH Associated domain 488 543 IPR025677 -
Mibi09g0648 1075 Pfam OST-HTH/LOTUS domain 578 634 IPR025605 -
Mibi09g0648 1075 Pfam OST-HTH/LOTUS domain 267 312 IPR025605 -
Mibi09g0648 1075 CDD PIN_limkain_b1_N_like 57 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0648 Mibi-ChrMibi09 8399405 8403245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0648 58 203 C2H2 Transcription Factor Family AT5G61190 40.940 1.12e-30 129