Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0643 ATGGATAAAAGGGCAATAATGAATTATATGACTGGTGAGAATATTATGCTACACAATTCGAGTTTACCTCAAAACCCCATTCAACCCCATAAGCACACAGAGGAGTCTCGTGTTAACCCTGTCTCCCACCAACATGTCATACTCTCAGCCGAAGATGTTGCTGACCGTAATGTCACCGGTGGCCGGTGGCCGCCGGAAGAGACCAAGGCTTTGCTCAAGATAAGGTCCGCCATGGACGCCGATTTCAAGGATGCATTCACCAAAGTTCATCTTTGGGAACAAGTCTCCAGGAAATTAGGGGAGCTAGGATATAGTAGGAGTGCTAAGAAATGCCAGGAGAAATTTGAGAACGTGTACAAGTACTGTAGAAGAACCAAGGAAGGTCGTTATGGCCGAACCAATGGCAAGACTTACCGATTCTTTGAGCTGTTAGAACCTCTTATGAACTCTCCTTACCCTGAAAAGAATGAGAAACAAGCGAGAGACAAAGCAACAACCACAATCCCAATGGATTTGTCCAATGTTATTCAAGGTGCAACTCAACATCCTTACCTTGAAAAGAATAAAAAACTAACCACAACCCCAATGGATTCGTCCAATGTTATTCAAGATTCAATTCTACATTCTATTAGATTCTCGAGTGACCCCTCTAGTTCAACTACTCCCTCTTCGGGTGAAGAACCGGAGGATGGTATTCGAAAGAAGAAAAGGAAAATGACGCAGTATTTTGAGGGGTTGATGAACAAAGTACTAGAGAGGCAAGCAAAGCTGCAGAAGAACTTTATGGAGATTTTACTCAAATGTGAACAAGATAGAATGGCAACGGAGAAATCATGGAAGATGCAAGAGTTAGCGAGGATAAAGAGGGAACGAGAGCTTTTAGCTCAAGAACGATCGATTGCTGCGGCTAAAGATGCTGCATTGCTTGCCCTTCTGAGGAAGTTCACAGCACAAACAGGGACCATAGAATTACCTGAGAACCTGCCCCCAAATGATTTAGATAAGGATGATGAAGAAAATGATAATGCAGGCAGTGGTGTTATTGAAATGCAAGAATGTAGAAATGGTGGAAATTCCACATTGACGAGTCCATCCTCTAGATGGCCCAAAGATGAAGTGGAAGCTTTGATTAGATTGAGGACAAACTTTAATGTGGAGAATGAAGGAAATGGGGTTAAAGGGTCTGTTCTTATATGGGATGAGATATCTTGTGCAATGAAAAAACTTGGGTATGATCGGGGTGCCAAGAGATGCAAAGAGAAATGGGAGAATATGAACAAGTACTTCAAGAGGGTGAAGAAGACAGACCAGAAAAAGCCGCAGAGTTCTAAAACATGTCCTTATTTCAACCAGCTGGATGCCCTGTATAATAATAATAATGAAAAGCCTAATGAGAAGGTGGAGGATTCAGCCAGTTCTGATAAGGATCAACTGAAGCCTGAGGAGCTATTAATGTATTTTATGGAGGTTCAGTCTCAGTCATCATCAGAGGATGCTGACAGAGAAGAAGGATCAACTGAAGCCTGA 1527 0.4244 MDKRAIMNYMTGENIMLHNSSLPQNPIQPHKHTEESRVNPVSHQHVILSAEDVADRNVTGGRWPPEETKALLKIRSAMDADFKDAFTKVHLWEQVSRKLGELGYSRSAKKCQEKFENVYKYCRRTKEGRYGRTNGKTYRFFELLEPLMNSPYPEKNEKQARDKATTTIPMDLSNVIQGATQHPYLEKNKKLTTTPMDSSNVIQDSILHSIRFSSDPSSSTTPSSGEEPEDGIRKKKRKMTQYFEGLMNKVLERQAKLQKNFMEILLKCEQDRMATEKSWKMQELARIKRERELLAQERSIAAAKDAALLALLRKFTAQTGTIELPENLPPNDLDKDDEENDNAGSGVIEMQECRNGGNSTLTSPSSRWPKDEVEALIRLRTNFNVENEGNGVKGSVLIWDEISCAMKKLGYDRGAKRCKEKWENMNKYFKRVKKTDQKKPQSSKTCPYFNQLDALYNNNNEKPNEKVEDSASSDKDQLKPEELLMYFMEVQSQSSSEDADREEGSTEA 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0643 508 MobiDBLite consensus disorder prediction 211 226 - -
Mibi09g0643 508 CDD GT1 62 126 - -
Mibi09g0643 508 MobiDBLite consensus disorder prediction 455 508 - -
Mibi09g0643 508 Gene3D - 368 431 - -
Mibi09g0643 508 Gene3D - 63 124 - -
Mibi09g0643 508 SMART sant 364 428 IPR001005 -
Mibi09g0643 508 SMART sant 59 121 IPR001005 -
Mibi09g0643 508 ProSiteProfiles Myb-like domain profile. 366 426 IPR001005 -
Mibi09g0643 508 CDD GT1 366 433 - -
Mibi09g0643 508 FunFam Trihelix transcription factor GT-2 63 124 - -
Mibi09g0643 508 MobiDBLite consensus disorder prediction 211 235 - -
Mibi09g0643 508 PANTHER FI21293P1 31 489 - -
Mibi09g0643 508 FunFam Trihelix transcription factor GT-2 368 431 - -
Mibi09g0643 508 Pfam Myb/SANT-like DNA-binding domain 366 455 IPR044822 -
Mibi09g0643 508 Pfam Myb/SANT-like DNA-binding domain 62 145 IPR044822 -
Mibi09g0643 508 ProSiteProfiles Myb-like domain profile. 55 119 IPR001005 -
Mibi09g0643 508 MobiDBLite consensus disorder prediction 462 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0643 Mibi-ChrMibi09 8365558 8369354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0643 355 473 Trihelix Transcription Factor Family AT1G76890 35.294 4.74e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi09g0643 Myb_DNA-bind_4 1.2e-19 CL0123