Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0634 ATGGCTGCTTCCGCTAATTCTCAATTTCTTCTCTTTCATTACTCTAGAAGGTTATTGTACATTCACTCCCATCAAAATTCACTCATTAATCCACCACCATCACCTTCAAATAACAACACAACATCCACAGAATCTTTGTTCCTTGGAAACGGTAATTTTGATGCGAATGTTATCATGGTACTCTCCATCCTCTTGTGTGCTCTTTTTTGTTCATTGGGCTTAAACTCCATCATCAGATGTGCCCTAAGGTGTTCCAACATCATCGTCCTCAATAATAATAACGACTCATCTTTAAACCCTCCAGCTCTGGTAGTGGCCAATATCGGAGTGAAGAAGAAGGCCTTGAAGACTTTCCCTATAGTGACATACTCTCCTGAGTTGATAATAAAGCTCCCAGGATTGGACACAGATTGTGCCATATGTCTCTCCGAGTTTAACAATGGTGATCGCCTTCGGATGCTTCCCAAGTGTAACCATGGATTCCATGTTCGTTGTATTGACAAGTGGCTTAGCTCCCATTCTTCTTGCCCCAAGTGCAGACACTGCCTTCTCCAGACATGTCACAAGATCATAGGCTCATCTACGATAACCAATACGATGTCGTCCCACACTTCTTCTTCTTCTTCTTCTGTTCCTCCGGCTGAAACTATTGTGAGGATTGTACCTTTAGAACCAGAGGGTATGGTACGTAACTATGCCTAG 702 0.4274 MAASANSQFLLFHYSRRLLYIHSHQNSLINPPPSPSNNNTTSTESLFLGNGNFDANVIMVLSILLCALFCSLGLNSIIRCALRCSNIIVLNNNNDSSLNPPALVVANIGVKKKALKTFPIVTYSPELIIKLPGLDTDCAICLSEFNNGDRLRMLPKCNHGFHVRCIDKWLSSHSSCPKCRHCLLQTCHKIIGSSTITNTMSSHTSSSSSSVPPAETIVRIVPLEPEGMVRNYA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0634 233 PANTHER RING-H2 FINGER PROTEIN ATL78 11 228 IPR044602 GO:0016567|GO:0016740
Mibi09g0634 233 CDD RING-H2_EL5_like 137 180 - -
Mibi09g0634 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 185 IPR013083 -
Mibi09g0634 233 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Mibi09g0634 233 SMART ring_2 138 179 IPR001841 -
Mibi09g0634 233 Pfam Ring finger domain 137 180 IPR001841 -
Mibi09g0634 233 FunFam RING-H2 finger protein ATL73 100 185 - -
Mibi09g0634 233 SUPERFAMILY RING/U-box 121 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0634 Mibi-ChrMibi09 8293851 8294552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0634 53 189 C3H Transcription Factor Family AT1G76410 48.571 1.54e-39 133