Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0633 ATGTTTGCTTCTTCTAACTCTCAAGTACTACTCTTTCCTGACCTTCTTGGTCATCACTTCCATTACTCTAGAAGGTTAATGTTCTTTGAATCCCACCTCAACTCATCTTCCCATAACAACTCCACAGGATCTTCCCTCCTAGGAGATGTTCGCTTGGATGTCAACGTTATCATGGTTCTCTCTGTCCTCGTATCTGCTCTATTCTGCTCACTGTTTTTAAACTCCATCATTAGATGTGTCCTGAGGTGTTATTTCAACATCCCAAATAATAATAACGACTCGTTTCCAAACCCTCCGGCTCGAGTGGCCAACACCGGAGTGAAGAAGAAGGCCTTAAAGACATTCCCTATAGTGACATACTCTTCCGAGTTGATAAAGCTCCCAAGTTTGGACACAGATTGTGCCATATGTCTCTCTGAGTTCAACAATGGCGATCGCCTTCGGATTCTTCCTAAGTGTAACCATGGCTTCCATGTTCGCTGCATTGACAAGTGGCTCAGCTCACACTCTTCTTGCCCTAAGTGTAGACACTGCCTTATTCAGACATGTCACAAAATTGTAGGATCATCCACCACGACCAATACGACGTCGTCCCAATCCTCTTCTACTGTTGCTCCTGTTGAAACTATTGTGAGCATAGTGCCTTTAGAACCAGAGGGTATGGTGCGTAACTATAGCTAG 681 0.4435 MFASSNSQVLLFPDLLGHHFHYSRRLMFFESHLNSSSHNNSTGSSLLGDVRLDVNVIMVLSVLVSALFCSLFLNSIIRCVLRCYFNIPNNNNDSFPNPPARVANTGVKKKALKTFPIVTYSSELIKLPSLDTDCAICLSEFNNGDRLRILPKCNHGFHVRCIDKWLSSHSSCPKCRHCLIQTCHKIVGSSTTTNTTSSQSSSTVAPVETIVSIVPLEPEGMVRNYS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0633 226 CDD RING-H2_PA-TM-RING 133 176 - -
Mibi09g0633 226 SMART ring_2 134 175 IPR001841 -
Mibi09g0633 226 Pfam Ring finger domain 133 176 IPR001841 -
Mibi09g0633 226 FunFam RING-H2 finger protein ATL73 96 181 - -
Mibi09g0633 226 SUPERFAMILY RING/U-box 133 181 - -
Mibi09g0633 226 PANTHER RING-H2 FINGER PROTEIN ATL78 22 221 IPR044602 GO:0016567|GO:0016740
Mibi09g0633 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 181 IPR013083 -
Mibi09g0633 226 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0633 Mibi-ChrMibi09 8285685 8286365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0633 27 180 C3H Transcription Factor Family AT3G10910 41.509 1.56e-40 135