Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0617 ATGAATAACATTCATCATCCATCCTTCACCACCAACAACAATAATATTAATCGTGAGGATACGAGCTCTACTTGGCCCATTACCTACCCAATAATCTCTTCCACTTCTTCTTCATCATCTTCAGGTTTTCTCATTAGTGACATGATTGGCATCAACTTATTGGAGAAAGAAGAATTAGAAGAAATAATAGAAGAAGAGGAAGAAGAAGAGGAGGAGGAAGAAGAACTTGGAGCCATGAAGGAGATGATGTACAAGATCGCCGCCCTACAACCTGTCGACATAGACCCTTCCACCATCCGCAAACCTAAGCGGCGAAATGTACGGATCAGCGACGACCCTCAGAGCGTCGCCGCCCGCCACCGCCGTGAGAGGATAAGCGAGAAAATCCGAATCCTCCAACGGCTTGTCCCCGGCGGTACCAAGCTCGATACTGCCTCCATGCTTGATGAAGCCATTCGCTATGTCAAGTTCTTAAAGAGACAAATCAAGTTACTCCAATCTCAACAACAACACTGCAACAACAATTTCAATGGTATCATGGCTACTTCTACTACTACTACTACCACCACTACTGCTAATTCAACTATCGCGGTCGATTGGCCTTTTACCTCTGCTGCCACGACCGGGGTAGGATTCAACCCCGGCTGTGAAAGCTCCTTGGGGTTTTACCATAAGTACACGCTTGCTGCTATGTTATGCAGGCGTGTACTGTTCTCTGCTCATATGACAATATAA 735 0.4599 MNNIHHPSFTTNNNNINREDTSSTWPITYPIISSTSSSSSSGFLISDMIGINLLEKEELEEIIEEEEEEEEEEEELGAMKEMMYKIAALQPVDIDPSTIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKLDTASMLDEAIRYVKFLKRQIKLLQSQQQHCNNNFNGIMATSTTTTTTTTANSTIAVDWPFTSAATTGVGFNPGCESSLGFYHKYTLAAMLCRRVLFSAHMTI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0617 244 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 109 158 IPR011598 GO:0046983
Mibi09g0617 244 Coils Coil 148 175 - -
Mibi09g0617 244 Gene3D - 112 179 IPR036638 GO:0046983
Mibi09g0617 244 FunFam BHLH transcription factor 112 176 - -
Mibi09g0617 244 Pfam Helix-loop-helix DNA-binding domain 119 158 IPR011598 GO:0046983
Mibi09g0617 244 SMART finulus 115 164 IPR011598 GO:0046983
Mibi09g0617 244 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 41 187 IPR045843 GO:0003700|GO:0006355
Mibi09g0617 244 Coils Coil 49 82 - -
Mibi09g0617 244 CDD bHLH_AtIND_like 110 170 - -
Mibi09g0617 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 172 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0617 Mibi-ChrMibi09 8047585 8048781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0617 78 170 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 76.344 1.40e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g0617 HLH 3.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0617 09 8047585 8048781 Mibi09g0617 09 8047585 8048781 ECH