Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0610 ATGTCTTTTTATCTCCAAAAGGGATCGACATCCATTGTTGGGTGCCTTTTTAGCTTCATGAACCGGGGGAGGCTGTGGTACTTATTGATGGGTACTACAAAATTGATTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCCTCAGATACTTTCTGAAGAGGAAGGTTATGGGTAAAAAATTCCCTTTTGATTTGATCGCTGAAGTAGAATTAAACAAGTACGCTCCGTGGGATCTTCCCGATAAGTCTAATCTGAGAACTGGAGATTTGGAATGGTACTTTTTTTGCCCCCGAGAAAAGAAATATGCTAGTGGGGCCAGAATGAATCGCGCTACGGAAGTTGGGTACTGGAAAACTACTGGGAGGGATAGAGCTGTTCATTACCAGAATCGAGTTGTGGGGATGATAAAAACTTTGATCTTTCATACAGGTAAAGCTCCTAAAGGAGAGAGAACTAATTGGGTTATGCATGAATTTAGGCTCGAAGATCAGGATCTCACTGATAAGGGCGTTCCTCAGGATTCCTATGTGCTTTGTAAAGTTTTCCATAAAGATGGTCCTGGTCCTAGGAATGGCGCCCAATATGGAAGACCATTCAATGATGAGGACTGGGATAATGATGAAGAAATTGATGGTGTGGGATCTCTCCCATTAATTGGTGTAGATGCTCCAATTGCCATTCAGCCTAATACACCTGGCAGTTCTACAGCAACTCATGGTCATCCCCTTGCAAGTACATGCGTTGGATCATCCCCATCGTCATGTCTTGTGCATCCTTTGGCTCCAAGTGATCAAGAGGATGACACAGTGGCTATGACTGAAAATAACGTTGAGAAGAATGATAATTCTGCTGTGGAGAAAGTAGCTGAAGGCGAACCTTGTTTGGATATCAATGATATATTCAAGGATCTGGGAGACCTTGACAATACAAACCAAATATATCCTGCAGGTAGCATGCCTATGGAGTTTGAAGATTGGGATTTCTTGGAGTTGCTTGACCTGGACCCTATGGTCCCACCAGACGGAATATGA 1035 0.4329 MSFYLQKGSTSIVGCLFSFMNRGRLWYLLMGTTKLIPGFRFHPTDVELLRYFLKRKVMGKKFPFDLIAEVELNKYAPWDLPDKSNLRTGDLEWYFFCPREKKYASGARMNRATEVGYWKTTGRDRAVHYQNRVVGMIKTLIFHTGKAPKGERTNWVMHEFRLEDQDLTDKGVPQDSYVLCKVFHKDGPGPRNGAQYGRPFNDEDWDNDEEIDGVGSLPLIGVDAPIAIQPNTPGSSTATHGHPLASTCVGSSPSSCLVHPLAPSDQEDDTVAMTENNVEKNDNSAVEKVAEGEPCLDINDIFKDLGDLDNTNQIYPAGSMPMEFEDWDFLELLDLDPMVPPDGI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0610 344 Gene3D NAC domain 44 187 IPR036093 GO:0003677|GO:0006355
Mibi09g0610 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 34 265 - -
Mibi09g0610 344 Pfam No apical meristem (NAM) protein 37 162 IPR003441 GO:0003677|GO:0006355
Mibi09g0610 344 SUPERFAMILY NAC domain 26 185 IPR036093 GO:0003677|GO:0006355
Mibi09g0610 344 FunFam Nac domain-containing protein 86 44 188 - -
Mibi09g0610 344 ProSiteProfiles NAC domain profile. 35 185 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0610 Mibi-ChrMibi09 7959208 7962179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0610 30 210 NAC Transcription Factor Family AT5G64060 67.403 2.83e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi09g0610 NAM 2e-34 No_clan