Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0581 ATGATTCTTCATGGCCGTCTTGAATGTCAGAACTACAACTTTGCCATTGTGACAATACGTGAGACCATTAAAATTGCTGAAGCCATAAGAGCCAGCAATATCACAACCCCTCCGGATACTCTTTTAAAGTGGCGTAAATCTTTAGAAGGCTTTGAGATGTTTGGCATGAAAGTGAGTTTCTTGATTGATAAGTTAGATGAGCTTATGGATTTATCTTCAAAATCCATGTCAAATTCCAAGAGGTACACAGAGACGAGAATTAAACGGGACCAAGCTGAAGAGGCAAAGAAAAATCTTGAACTAAAGCTTGAGGAAGTGAATAAGAACATAAGTAGACTTGGTGTTGAGCTTAACTCCCAAAATATGAGCCTTCAGCAGTTGGGGGCTGCGTTTCAACATCTGGCGAATGCTCCTTGCTTTTCTGATACTGAGGAGAAAATTAACGAGGTTACAAGTAAGGATCCAGGAAGAGCATTGAGGCTAACGAGATCAACCATTGATTCTGAGTCTCTTGCTTTTGAGCGAGCTAAAGAAGTTCAAGCAAATATATCCCATGAATTTCCAAGCCTTATAAAGTGCATGCTCCCATCACATGTTTCTGGTGGATTTTGGCTGGGTCTTCCTAAAGATTTCTGTGTAATGCATTTGCCCAAGGTTGATACTATGATTGTTTTGGAAGATGAAAATGGAAGAGAATACAAAACAAAATATCTTATCGAGAAGGTGGGCTTAAGTGGTGGATGGAGAGGGTTTTCCATTGCTCACGATTTACTTGAGGGGGATGTTTTAGTTTTCCATTTAGTCCAGCCATGCAAGTTCAAGGTGTACATCATAAGATCTCATGGGTCAAACGAAGTGGATGTTGCACTTGGCCTTCTGTATTTAGATGGTGGCATGAAGCAACATGAATCTTATGTTCCTCAAGAAAATGATATGAGAAATAGCACAATGATATGTAATGCTGAAATGCCGCCATCAGATCAACTTGAAAATACTAGTGACCTTGATGAAAATTTTGGCTCTGAAGTTTTGGATGGGATTAGATTATCAGAATCTACAATCACATTCCAACAAGTTACAAGTATTGAGGATTTTAGCATTGTGGTTAATGGTCTGGTACTTGACTCGGAACTACCCAAGCACCTCAAGACAAAGTATTATGAACTTTGTTGTAGCCAGGGAAAGTTTCTTCATGAGCATCTTCTTGAAGGTCAGAACTGTAAGCTTGTTGTTGGAATGATCTGTGAGACCATTAATATTGCTGATGCCATTAGAGCCAGCAAGGTTACAACCTCTTCAGATTGTTTTGAAGTGTGGTATAAATCTTTGAAAGGCTTTGAAATTTTCGGCATGAATGTTGGCTTCTTGATTGCCAAGCTTGAACGACTCATGAGTTTGGCTTCAAAATCCAAGATGTACAATGAGACAAGAATTAAACGAGACCAAGCCAAAAAGGAAGAGAAAGCTCTTGAACTAAAGCTGAAGGAAGTGAGAAAGACTATACGTAGACTTGATAATGAGATTGGCTCCCAAAATCTGAATGTTGAGAGTTTGGAGGCTGAGTTTCAAGTTCTGGCTAATACTCCTTGGTGA 1593 0.3942 MILHGRLECQNYNFAIVTIRETIKIAEAIRASNITTPPDTLLKWRKSLEGFEMFGMKVSFLIDKLDELMDLSSKSMSNSKRYTETRIKRDQAEEAKKNLELKLEEVNKNISRLGVELNSQNMSLQQLGAAFQHLANAPCFSDTEEKINEVTSKDPGRALRLTRSTIDSESLAFERAKEVQANISHEFPSLIKCMLPSHVSGGFWLGLPKDFCVMHLPKVDTMIVLEDENGREYKTKYLIEKVGLSGGWRGFSIAHDLLEGDVLVFHLVQPCKFKVYIIRSHGSNEVDVALGLLYLDGGMKQHESYVPQENDMRNSTMICNAEMPPSDQLENTSDLDENFGSEVLDGIRLSESTITFQQVTSIEDFSIVVNGLVLDSELPKHLKTKYYELCCSQGKFLHEHLLEGQNCKLVVGMICETINIADAIRASKVTTSSDCFEVWYKSLKGFEIFGMNVGFLIAKLERLMSLASKSKMYNETRIKRDQAKKEEKALELKLKEVRKTIRRLDNEIGSQNLNVESLEAEFQVLANTPW 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0581 530 SMART B3_2 190 281 IPR003340 GO:0003677
Mibi09g0581 530 CDD B3_DNA 188 279 IPR003340 GO:0003677
Mibi09g0581 530 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 161 282 IPR044837 -
Mibi09g0581 530 Coils Coil 473 521 - -
Mibi09g0581 530 ProSiteProfiles B3 DNA-binding domain profile. 190 281 IPR003340 GO:0003677
Mibi09g0581 530 Coils Coil 82 116 - -
Mibi09g0581 530 Pfam B3 DNA binding domain 191 279 IPR003340 GO:0003677
Mibi09g0581 530 SUPERFAMILY DNA-binding pseudobarrel domain 183 281 IPR015300 -
Mibi09g0581 530 Gene3D - 168 281 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0581 Mibi-ChrMibi09 7505260 7510865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0581 164 279 B3 DNA Binding Superfamily AT3G19184 52.586 5.68e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi09g0581 B3 3.5e-15 CL0405