Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0578 ATGTCTTCTTCATCGCATCCAACAAGTTTGTGCACAAACTGGTTGATTGTGAAAGTATTAGAGATTTTTAGAATATTGTGGTTAAAGATTTGTGGGTTTCCAGAGTTACCAGAGAAATCACAAGCTCATTTGATCCTAAAAAGAAAGGCACAAATTGGTTCAACAATGGCAGACAGAGAGGAACCTATTAATCCATGGGCTGCGGTATTTGAAAAATTCTATAAAAGGGCAAGATCTTCAACTACCACTCCAAAGGTTACAAATAAGAACCCAGAAAGAATTTTGAGGTTGAAGAGATCAACCATTGATTCTAAGTCCCTTGCTTTTGAGCAAGCGAAAGAGGGTCTTCCTAAAGATTTCTGTGAAGTGCATATGCCAAGGTTTGATACTATAATTGTTTTGGAAGATGAGAATGGAAGAGAATACATAACAAAATATCTTTTTGAGAGGACGGGCTTAAGTGGCGGGTGGAGAGGCTTTTCCATTGCTCACAAGTTACTTGAGGGGGATGTTTTAGTTTTCCATTTAATACAACATTACAAGTTCAAGGTGTACATCATAAGATCTCATGGGTCAAAGGTAGTGGATGTTGTGCCTGGCCTTCATTTTGATGGTCACATGAAGCCACATGATTCTGATCAAACCTTTCTAAATGTTCCTCCAGAATATTATCCAAGCAATAACACAATGATTAGTGATGCTCATATACTGTCATCAGATCAACGTGGAAATACGAGCAATCTAGATGAAAATCTTGGCTCTCAAGTTTTGAATGAGATTAGATTATCAAAATCTACAGCCACTTTCCAACAAGTGAAAAGTATTGAGAATTTCCGCATTGTGGTTGATGGTTTGGTAGTTGACTCAGAACTATCCAGACACCTTAAGACTAAATACTATGAACTATGTTGCAGTCAAGGGATGTTTCTTCATGAGAATCTTATCAAAGGTCAGGATGGTAAACTTGTTGTTGCAATGATCTGTGAGACCATTAGTATTGCTGATGCCATTAGAGCAAGCAAGATCGCAACCTCTTCAGATAGTTTTGCAATGTGGCATAAATCCTTAAAAGGCCTTAAAGTTCTCGGCATGAATGTCAGTTTCTTGCTTGCTAGGCTAGAACAGCTCATGAGTCTAGATTCAAAAGCCAAGTCAAAGTTCTTTCGTTACGCAGAGATAAGAATTGAACAAGACCAAGCTGAAAAGGAAAAGAAAGGTCTTGAACTAAAGCTTCAAGAAGTGAAGAGGACCATAAGTAGACTTGATGGTGAAATTGACTCTCAAAATCAGGAACTTGAGAGTTTGGAGGCCGGGTTTCAAGTTCTGGCTAGTACTTTGTATTGA 1344 0.3824 MSSSSHPTSLCTNWLIVKVLEIFRILWLKICGFPELPEKSQAHLILKRKAQIGSTMADREEPINPWAAVFEKFYKRARSSTTTPKVTNKNPERILRLKRSTIDSKSLAFEQAKEGLPKDFCEVHMPRFDTIIVLEDENGREYITKYLFERTGLSGGWRGFSIAHKLLEGDVLVFHLIQHYKFKVYIIRSHGSKVVDVVPGLHFDGHMKPHDSDQTFLNVPPEYYPSNNTMISDAHILSSDQRGNTSNLDENLGSQVLNEIRLSKSTATFQQVKSIENFRIVVDGLVVDSELSRHLKTKYYELCCSQGMFLHENLIKGQDGKLVVAMICETISIADAIRASKIATSSDSFAMWHKSLKGLKVLGMNVSFLLARLEQLMSLDSKAKSKFFRYAEIRIEQDQAEKEKKGLELKLQEVKRTISRLDGEIDSQNQELESLEAGFQVLASTLY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0578 447 Coils Coil 390 438 - -
Mibi09g0578 447 Pfam B3 DNA binding domain 112 188 IPR003340 GO:0003677
Mibi09g0578 447 CDD B3_DNA 116 188 IPR003340 GO:0003677
Mibi09g0578 447 Gene3D - 74 190 IPR015300 -
Mibi09g0578 447 SMART B3_2 109 190 IPR003340 GO:0003677
Mibi09g0578 447 SUPERFAMILY DNA-binding pseudobarrel domain 115 190 IPR015300 -
Mibi09g0578 447 ProSiteProfiles B3 DNA-binding domain profile. 99 190 IPR003340 GO:0003677
Mibi09g0578 447 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 96 190 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0578 Mibi-ChrMibi09 7461809 7465848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0578 115 214 B3 DNA Binding Superfamily AT3G19184 47.222 1.14e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi09g0578 B3 1.8e-11 CL0405