Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0572 ATGAAGTTGACCGGAGATAGTATGCCGTCGGAAGAAGCCACGGCGGACAGCGACGGCGGCCGTACGGTCGTCGTTGGTGTGAAGTTGGATGCTAGGAGTAGGGAATTGCTCACTTGGTCACTTGTTAAAGTGGCTGAGCCTGGTGACCATGTCATTGCTCTTCACGTCATCAACACTATGCCTGCGGGTACGGGATCGCTTCTTTCTCTTGTAAATACTTTTGATTCTGTTCTTGCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTTAAGCTGAAAGTCTGCAGAGGTGAGTCTGCTCGGAAACTTCTTGTTAGGGAGGCGAGGTCGTTTAGTGCATCCACTGTAATTGTGGGGACTTCTAAAACGCATCACACAATCCGCTCAAATGTAACTGTTGCCAAGTACTGTGCGAAGAAATTGCCCAAATGTATCTCGGTTTTTGCGGTTGACAATGGCAAAATCTCGTTCCACAGAGAGGCTACAAATATGTGTGGTGCTCAAGTAAAACTAAATGAGGGCTCAGCTTCGTTAAGAAAACCCTTCAAGCCTTGTACGAAGACAAATCGCAGTAGCTGTGAATGTTGTGAGCGGGTGTTAGCACTTCCAGAGAGTGCTGCTATTGAAGATCTGCCTGATGATCAGGAAATGAAAGATTCATTAGCTATAGTACCGCTCCAGAAAATTGGGGATAGTCAAGGTTGTGCAACTGTGGTTCAGGAATCAAACCAGTCTAAACATGGCTGGTCTGTTCTTCGCCAGGTATTTCTGCCCAAAAAGCACATGCAGAAATCGTATGTGAGCAACCCATATATTTTTCAAGGGGCAGTCAAGCAGACCAGCTGGCATTCATCAGCTGTAGTCCATCCAGATCTTAAACAAATTAATATTGACAAAAATGACAATACTACCCTTGATGGGCAGAGTGGTGCCATTGTGCCATTCAGATCTGCATCTAACTCTGGCTTCAGTAACTTTCATGAAGAATTGTCCAGCTTACAGGATAAGTACTCATCTTCATGCAGAGTGTATAGTTTCCAAGAACTTGCTTCTGCAACTGCCAACTTCTCACCTGAAAATTTGGTTGGCAAAGGCGGCAGTAGCTATGTTTATAGAGGATGTCTTCCAGATGGCAAGGAGGTGGCTGTGAAAATTTTGAAGCCATCAGAAGATGTTGTCAAAGAGTTTCTTTTGGAAATTGAGATCATCACAACTTTGCATCATAAGAACATAATATCTTTATCTGGGTTTTCTTTTGACGACAATAATTTGCTTTTGGTTTATGACTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAAAGCATTTGGATGGCAAGAGAGGCATAAGGTGGCTGTGGGCGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTGCGCAGGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCCGATTTTGGACTAGCCAGTTGGGGTTCTTCTTCATCCCATGTTACTTGTACAGATGTGGCTGGAACCTTCGGATATTTGGCTCCAGAGTACTTTATGCATGGTAGGGTAACTGACAGAATCGATGTATATGCGTTTGGTGTCGTACTTCTTGAGCTTCTTTCCAGCAGGAAGCCGATTAACAACGAATCCCCCAAGGGCCAGGAGAGCCTTGTGATGTGGGCAAGACCAATTCTAAAGGATGGAAAGCCCTCCCAGTTGCTTGATTCAAGCATTGGTGATCCCGAAAATGGGGTAATTGACAGAATGGTCTTGGCTGCTACCCTTTGCCTAAGACGATTACCTAAATGTCGACCTCAAATCAGCATCATTTTGAAACTTCTGCAAGGTGATGAGGAAGTCACAAGTTGGGCAAAACAAGAAATTGGGGTGCCGGAAGAACTCGATGCATTTGATGGGGGACTGAATAATATTCAGTCTCATCTGAACCTTGCTTTGCTGGATCTGGACGAAGATACAGTTTCTGTAAGTAGCACTGAGCAAAGTGTCTCATTGGAGGACTACTTACAAGGAAGATGGAGTCGCTCGTCAAGTTTTGCTTAG 2100 0.4448 MKLTGDSMPSEEATADSDGGRTVVVGVKLDARSRELLTWSLVKVAEPGDHVIALHVINTMPAGTGSLLSLVNTFDSVLAVYEGFCNLKQVDLKLKVCRGESARKLLVREARSFSASTVIVGTSKTHHTIRSNVTVAKYCAKKLPKCISVFAVDNGKISFHREATNMCGAQVKLNEGSASLRKPFKPCTKTNRSSCECCERVLALPESAAIEDLPDDQEMKDSLAIVPLQKIGDSQGCATVVQESNQSKHGWSVLRQVFLPKKHMQKSYVSNPYIFQGAVKQTSWHSSAVVHPDLKQINIDKNDNTTLDGQSGAIVPFRSASNSGFSNFHEELSSLQDKYSSSCRVYSFQELASATANFSPENLVGKGGSSYVYRGCLPDGKEVAVKILKPSEDVVKEFLLEIEIITTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSKAFGWQERHKVAVGVAEALDFLHNGCAQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVTCTDVAGTFGYLAPEYFMHGRVTDRIDVYAFGVVLLELLSSRKPINNESPKGQESLVMWARPILKDGKPSQLLDSSIGDPENGVIDRMVLAATLCLRRLPKCRPQISIILKLLQGDEEVTSWAKQEIGVPEELDAFDGGLNNIQSHLNLALLDLDEDTVSVSSTEQSVSLEDYLQGRWSRSSSFA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0572 699 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 327 432 - -
Mibi09g0572 699 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 126 - -
Mibi09g0572 699 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Mibi09g0572 699 Gene3D Phosphorylase Kinase; domain 1 320 432 - -
Mibi09g0572 699 Pfam Universal stress protein family 21 144 IPR006016 -
Mibi09g0572 699 PANTHER OS08G0249100 PROTEIN 73 639 - -
Mibi09g0572 699 Pfam Protein kinase domain 361 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0572 699 SMART serkin_6 358 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0572 699 FunFam Putative receptor-like serine/threonine-protein kinase 433 643 - -
Mibi09g0572 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Mibi09g0572 699 SUPERFAMILY Protein kinase-like (PK-like) 339 627 IPR011009 -
Mibi09g0572 699 Gene3D HUPs 20 153 IPR014729 -
Mibi09g0572 699 ProSiteProfiles Protein kinase domain profile. 358 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0572 699 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Mibi09g0572 699 Gene3D Transferase(Phosphotransferase) domain 1 433 642 - -
Mibi09g0572 699 CDD USP_Like 22 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0572 Mibi-ChrMibi09 7389206 7392474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0572 346 698 Trihelix Transcription Factor Family AT1G70460 38.781 2.46e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi09g0572 Pkinase 1.4e-41 CL0016