Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0558 ATGAATGGTGAATTGGAGTTACCTCCTGGCTTCAGATTCCACCCAACCGACGAAGAGCTCGTCAATCACTATCTCTGCACCAAATGTGCAGCTCAATCCATTTCCGTCCCCATCATCAAAGAGCTCGATCTCTACAAATTCGATCCATGGCAACTCCCTGAGATGGCTCTGTACGGAGAGAAGGAATGGTACTTTTTCTCACCTAGGGATCGTAAATACCCTAACGGTTCGAGGCCGAACCGGGCGGCTGGAAGTGGCTACTGGAAGGCAACCGGAGCCGACAAGCCGATCGGTAAGCCGAAGCCGCTGGGGATAAAGAAGGCTCTCGTCTTCTACGCCGGTAAGGCTCCTAATGGAATCAAAACCAATTGGATCATGCACGAATATCGCCTCGCTAACGTCGATAGATCCGCCGGCAAGAAGAAAAACCTGAGGCTTGATGATTGGGTGTTATGCCGAATTTACAACAAGAAAGGAACGATTGAGAAGTTCAATGTGACGGATCAGAAATCCGGTGAGCTATCGGAGTTTCATGAGCATGAGACCAAACCGGATATCAAACCGTACGATCAGAGTACTGTGCAGGCGCCGGCGCCGCCGTATGCGGCGGCGGAGGCACCGTCGGCGTTCGCGAGTGACCAATTCTATATGGACACGTCGGATTCCGGGCCGAGGATGAACACGGACTCGAGTTCCTCGGAGCACGTGGTTTCGCCAGACGTCACGTGCGATAAGGAGGTACAGAGTGAGGCCAAATGGAATGAGCTAGGGTTAGGAGAAGATGGTGATGGGCTTAATTTTGAGTTGAATTATGTTTATAATGATAACATGAACATGAATATGAATAATCTCTCTGGAGAAGATCCTTTTGGTTCTTCTGTACAGTATCAGATGAGTCAGCTCTCGCCATGGCAGGACATGTTCATGTTTCCACAGAAGCCATTTTGA 948 0.4979 MNGELELPPGFRFHPTDEELVNHYLCTKCAAQSISVPIIKELDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPNGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTIEKFNVTDQKSGELSEFHEHETKPDIKPYDQSTVQAPAPPYAAAEAPSAFASDQFYMDTSDSGPRMNTDSSSSEHVVSPDVTCDKEVQSEAKWNELGLGEDGDGLNFELNYVYNDNMNMNMNNLSGEDPFGSSVQYQMSQLSPWQDMFMFPQKPF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0558 315 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mibi09g0558 315 MobiDBLite consensus disorder prediction 220 238 - -
Mibi09g0558 315 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Mibi09g0558 315 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Mibi09g0558 315 MobiDBLite consensus disorder prediction 220 241 - -
Mibi09g0558 315 FunFam NAC transcription factor 16 161 - -
Mibi09g0558 315 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Mibi09g0558 315 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0558 Mibi-ChrMibi09 7183910 7185399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0558 1 315 NAC Transcription Factor Family AT1G01720 59.875 2.04e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi09g0558 NAM 7.2e-38 No_clan