Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0528 ATGCTTCGCCCAAGATTAAAGACAAGTTTACTGCTATTCCTCAGTGTTCTGGGACTTAGTTCTGCAATCAGAGATCCTGATGTGGAAGGTGAAGCTTTGGTTGAAGTTAGGAAGGCTCTCCATGATCCCACCCATCAATTAGCTGATTGGAATTATTTTTTTGTGTCTGCATGCGTTAGTTGGTCGCATGTCACTTGTAGAAACGGACACGTTATATCCCTGAGCCTGGCTTCATATGGACTTTCTGGAACAATATCTCCTTCAATAACCAAATTGAAATATCTGTCTAGCTTGGAGTTGCAGAACAACAAATTCTCAGGCCCCTTACCTGATTATATTGCCAATCTGACACAACTTCAATATCTCAATCTTGGAGACAATCATTTTAGTGGTTCCATTCCAGCTAGCTGGGAGAAACTTCAAAATCTAAAGAATCTGATTTTGAGAGGGAACAATTTATCCGGACCCATACCAGACACTCTCACTAATATTAGTGGGTTGGCAGAACTGGATCTTTCATCTAATGGTCTAACTGGAGACATCCCAATGCAATTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACTCACCTTCATTGTGGATCTCACTTGGGGCGGCCTTGCGTTTCTAATTCTGCTAAACTAGCTTGTACCAACAAACCAAAAGTTGCAGTGGTTGTGAGTTTTGCTAGTTGTGGTGCATTAGTACTTCTTTGTCTTGGGGCTAACTTTGCATATCGATATCGTTACGTACAAAGACACAAAAATGAAATCTTCTTTGACGTTTCAGGTGAAGATGAGAGCAAAATTTCCTTGGGACAACTGAGAAGATTTTCCTTGAGAGAGCTACAACTTGCCACCAAAAATTTCAGTGAAAGCAATGTGATAGGTCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTTTCAGATGACACTAGAGTTGCTATCAAACGTCTAACTGATTATAATAATCCCGGTGGTGAAGCTGCATTCCTAAGAGAAGTTCAACTAATAAGTGTTGCGGTTCACCGGAATCTCCTCCGCTTAATCGGATTCTGCACAACTTATACTGAGAGAATCCTTGTGTATCCTTTCATGGAAAATCTTAGTGTAGCGTATCGCTTGAGAGATTTAAAACCTGGTGAGAAAGGCTTGGACTGGCCAACAAGGAAGCGTGTGGCTTTTGGTACAGCACATGGCTTGGAGTATCTCCATGAGCAATGTATTCCCAAGATCATACACCGTGATCTTAAAGCTGCAAACATATTATTAGACAATAATTTTGAAGCTGTACTTGGAGATTTCGGGTTGGCGAAGCTTGTTGACACAAGGCTGACCCATGTTACCACTCAGGTGAGAGGCACAATGGGTCACATTGCCCCAGAATATCTCTCCACTGGAAAGTCTTCAGAGAAGACTGATGTCTTTGGATACGGCATTACACTCCTTGAACTTGTCACAGGTCAGCGCGCCGTAGACCTGTCTCGGCTTGAAGAGGAGGAGGATGTTCTTCTACTTGATCATATAAAGAAACTACTGAGAGAGAACAGGCTAGAGGACATAGTGGATAGGAATCTGGAGAGTTATGATCCAAAAGAAGTAGAAACAATAGTTCAAGTGGCATTGCTTTGCACACAAGGGATGCCAGAGGACAGGCCAAGCATGTCAGAGGTGGTGAATATGCTTCAGGGCGTGGGTTTGGCAGAGAGATGGGCTGAGTGGGAGGAATTGGAAGATATCAGTAATCAGGAATCCTCATCACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACCCTGCAAGAGGCTATACAGCTTTCTACTGCAAGATAA 1836 0.4265 MLRPRLKTSLLLFLSVLGLSSAIRDPDVEGEALVEVRKALHDPTHQLADWNYFFVSACVSWSHVTCRNGHVISLSLASYGLSGTISPSITKLKYLSSLELQNNKFSGPLPDYIANLTQLQYLNLGDNHFSGSIPASWEKLQNLKNLILRGNNLSGPIPDTLTNISGLAELDLSSNGLTGDIPMQFFSVPSFNFSNTHLHCGSHLGRPCVSNSAKLACTNKPKVAVVVSFASCGALVLLCLGANFAYRYRYVQRHKNEIFFDVSGEDESKISLGQLRRFSLRELQLATKNFSESNVIGQGGFGKVYKGVLSDDTRVAIKRLTDYNNPGGEAAFLREVQLISVAVHRNLLRLIGFCTTYTERILVYPFMENLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPKIIHRDLKAANILLDNNFEAVLGDFGLAKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAVDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLESYDPKEVETIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEELEDISNQESSSLSHHFAWADESTLQEAIQLSTAR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0528 611 FunFam Somatic embryogenesis receptor kinase 1 259 366 - -
Mibi09g0528 611 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 574 - -
Mibi09g0528 611 SUPERFAMILY Protein kinase-like (PK-like) 268 563 IPR011009 -
Mibi09g0528 611 ProSiteProfiles Protein kinase domain profile. 290 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0528 611 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Mibi09g0528 611 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Mibi09g0528 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Mibi09g0528 611 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 187 - -
Mibi09g0528 611 Gene3D Phosphorylase Kinase; domain 1 259 366 - -
Mibi09g0528 611 Pfam Protein kinase domain 291 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0528 611 SUPERFAMILY L domain-like 30 238 - -
Mibi09g0528 611 Gene3D Transferase(Phosphotransferase) domain 1 367 583 - -
Mibi09g0528 611 Gene3D Ribonuclease Inhibitor 26 210 IPR032675 -
Mibi09g0528 611 FunFam Somatic embryogenesis receptor-like kinase 1 367 583 - -
Mibi09g0528 611 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Mibi09g0528 611 SMART serkin_6 290 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0528 Mibi-ChrMibi09 6849364 6853126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0528 11 606 Receptor kinase-like Gene Family AT5G65240 56.478 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi09g0528 Pkinase 1.1e-43 CL0016