Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0527 ATGGGTTCCCCTCCGGTGAATTCTTCTCTACCCATAGCTTACCAAGCATGGACAAGCCTGGCCGTACCGGACTGGCTGAACAAAGGGGACAACGCGTGGCAGATGACGTCAGCAACCCTGGTAGGAATACAAAGCATGCCGGGCCTTGTCATCCTCTACGGTAGCATTGTAAAAAAGAAATGGGCCGTCAACTCTGCTTTCATGGCCCTCTACGCCTTCGCCGCCGTTTGCATCTGTTGGGTCACTTGGGCCTACAAGATGTCCTTCGGCGAGAAGCTCTTGCCCTTCTGGGGCCGGGCCGGGCCGGCCCTGGGCCAGAAATTCCTGGCCCGCCAGGCCGCGCTGCCCGCGACCCCGCATTATTATAAAACCGGTGGGCTGGAGACGTCGGAGATTGAGCCCTTTTACCCGATGGCCACGATGGTGTGGTTCCAGTGCGTGTTCGCCGCCATCGCGGTGGTTATACTCGCCGGATCGGTGCTGGCTCGGATGAATTTTAAGGCATGGATGATGTTTGTGCCGTTGTGGTTGACTTTTTCTTATACCGTGGGGGCTTTTAGCTTGTGGGGTGGTGGTTTTTTGTTTCATTGGGGTGTTATGGATTATTCCGGCGGCTATGTTATTCACCTTTCTTCTGGTATTGCTGGTTTCACTGCAGCTTATTGGGTGGGGCCAAGGTCGAAGAAGGACAGGGAGAGGTTTCCGCCGAACAACGTGTTGCTGACGCTGGCCGGGGCGGGGCTGTTGTGGCTGGGATGGGCGGGGTTCAACGGCGGCGATCCCTATTCAGCCAACACAGACTCATCCATGGCGGTTCTCAACACCAACATATGTGCTGCCACCAGTCTTCTCGTCTGGACTTGGCTTGACGTCATCTTCTTCCACAAACCCTCCGTTATCGGCGCCGTCCAAGGCATGATCACCGGTCTCGTCTGCATCACTCCCGCCGCCGGTCTGGTTCAAGGATGGGCAGCCATAGTGATGGGAGTACTATCAGGAAGTGTCCCATGGTTCAGCATGATGATCTTAGGTAAGAAGCTCAAAATATTCCAAAAAGTAGATGACACCCTCGCCGTCTTCCACACACACGCCGTCGCCGGACTTCTCGGCGGCGTCCTCACCGGCCTCTTCGCCGAGCCTCGCCTGAGCGCCCTCTTCCTCCCCGTCACTAACTCCCGAGGAGGAGTGTACGGCGGCTCCGGTGGTGTCCAAATCCTAAAACAAATAGTGGGAGGCTTGTTCATCATAGGGTGGAACCTAGTTGTCACATCCATTATATGTGTTGTCATAAGTTTTTTAATTCCTTTGAGGATGTCTGAGGAGGAACTGGTGATTGGAGATGACGCTGTTCATGGCGAAGAAGCTTATGCTTTGTGGGGTGATGGTGAGAAGATGAATATATATTCTGATGATACTACTCATCACAATGCAGTTTTAGCTTCAAGTGGTGCCACTCAAGTCGTCTAA 1467 0.5406 MGSPPVNSSLPIAYQAWTSLAVPDWLNKGDNAWQMTSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVCICWVTWAYKMSFGEKLLPFWGRAGPALGQKFLARQAALPATPHYYKTGGLETSEIEPFYPMATMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTWLDVIFFHKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGVLSGSVPWFSMMILGKKLKIFQKVDDTLAVFHTHAVAGLLGGVLTGLFAEPRLSALFLPVTNSRGGVYGGSGGVQILKQIVGGLFIIGWNLVVTSIICVVISFLIPLRMSEEELVIGDDAVHGEEAYALWGDGEKMNIYSDDTTHHNAVLASSGATQVV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0527 488 Pfam Ammonium Transporter Family 32 456 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mibi09g0527 488 Gene3D Ammonium transporter AmtB like domains 11 459 IPR029020 -
Mibi09g0527 488 PRINTS Rhesus blood group protein signature 271 293 IPR002229 GO:0005886
Mibi09g0527 488 PRINTS Rhesus blood group protein signature 240 258 IPR002229 GO:0005886
Mibi09g0527 488 PRINTS Rhesus blood group protein signature 326 344 IPR002229 GO:0005886
Mibi09g0527 488 PRINTS Rhesus blood group protein signature 145 161 IPR002229 GO:0005886
Mibi09g0527 488 FunFam Ammonium transporter 13 459 - -
Mibi09g0527 488 ProSitePatterns Ammonium transporters signature. 201 226 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mibi09g0527 488 SUPERFAMILY Ammonium transporter 25 438 - -
Mibi09g0527 488 TIGRFAM amt: ammonium transporter 30 456 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mibi09g0527 488 PANTHER AMMONIUM TRANSPORTER MEP2 18 466 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0527 Mibi-ChrMibi09 6830945 6834675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0527 138 475 Inorganic Solute Cotransporters AT2G38290 71.302 8.57e-168 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0527 09 6830945 6834675 Mibi09g0527 09 6830945 6834675 ECH