Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0517 ATGTCGGGAGGGACGAGGCGAGAGAGAGAGAGAGAGACTAGTGAGAGAAAACGTGAGAGACCTCTTTCGTTTAGAACTTTCAGAATATACAAACGAAGAGCCCTTCCCTCGCTTCAAATATTCATTCTTCATTCTCACATTCCCTGCGATTTCACTGGTGATTGTCACTGTTTGGTAGCATACTACAAGATGCCTCTCTTGAAAAGGAAGCCTTTTGTCTTGGCGGAGCCACCTAAGGATTTGGAGCCACATGAGCTTGTCCATCAAGTTCGATTTACAAAAGAAATTTTCCGAGATTATCATGATTATTTGAACCGCATAAATTTGTATCGCCAGAGAGTCTGGACATGCAAAGTCACTGGGAAAACTAACTTGACTTATGAAGAGGCTATGGTGTCAGAAAAGCGTGCCACTGAAAAAGTCCAACAAATTCCCAAAGAATTAATGGCTCCTGCACTGAGGATTATTCAATACAGCACGCTTCAATTGAAGGAACTTGCCGATGCAATAGCTGAAAAATTGCAGGAATTGGTGTATGTGGGTGCTGAGCTGCACGGGAAAAAAGATGATGGAGAGCATCCCTGCAAAATATTGAAAGTCTTGAAGGAAGGAGTCGATGGGCTTCGCTATGAGGTAGCTTGGCTTGACAAAAACAAGAGCACGATTGAAAAAGCAGAAGTCAGTGCCAAGGATTTGGTGCAGAAGAAGTTTCCTTTTAGCAGGAACATCTTGAAATCTTTTATCCGGGAATCTACTTATCGTAATGCACCTTGGGTGATACATGATGAATTGGCACGAAATTATGGAATCTCAACTGATATCCCAGAGGAATTAAAAGGAAGAGCTTTCTTCAACAATGGACTTTTAATTTGCAAGAAGAAAAGGAAAAATGAGGATGTAAATGGAGAAGCTGAAGATTGCAAAAGGAAGAAGTTGGATCATGCAAAAAATAATGGTTCCTCTTTAGTGAAAGAAAATGGCCAGTGTGAGAAAGAACCTATTAAATATCCGATTGATGATCTATTGGTGAAGCCTAGTCCAAACGATCCTGTTTTTGCTGATCGCCCTTCTCCATCGAGAGACTTCAATGTTCCAGTTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTAGTTCTTTTGGTAGGCTGTTGCACTTGTCACCCTACTCTCTGGAAGATTTTGAAAACTCAGTCTGCCACAAGGAAAGCAATGTGGTTCTTCTTGTGGAATCTCATGCAGCACTCTTGCGAGTGCTATTGAAAAACGGTGGTGAGTATGCTTCAGCTGTAGAGAAAAGAAAACGGAGCCATAAGATTAGAATGAGTAATTGGCAAGAGTATTTATGTGATTTTCTAGAAGTGATCAATGTTCCTGGATTTCGGCAGTTTGAAGCTACCATTAAAAGGGGACATTATGGCCTCGTTGATATTGATGCTAAGCTTGAAATCTTGAGTGAATTGGTCAACCAAGTTCTTGAAAGCTCCATTTTTAGGGAAAAGTTGGATGAGGTTATCGAACAGCTGAATGAACTTGGTGCTACTAGAAGAGGAGAAGCACTAGAAGATGGAAGAAAAAGAAGAGAAGAAAAGGAACGGCTGAAAGCCAGCTTTGAAAGCAATGGGGGTATGGATGAACGCTGTCAAACAAATGGAGCAGCTGTCTCAATGAAAAATAATCACAGTAGCCAGGACGGAGACATAGAAAAGAAGAGAAGTGGGGAGAATGAATCATATATGAACGGGGATGCTTTGGGTGGAAGCATGGATATGCATTCAAATGGTACATCCAAAAGGTCATCTAAGAAGCTGAGTTTAGAACTGAAAGAACCAGCAGAGAATGGAAATGCATCATCAAGAAAGGAATCACAGAAGCAATTAATGGGGGAGAAAGATCCATCAGACAAGAATAGTATAGAACAGAGGAGAGAATATTTTGAACGAGAGATGGAAAAACTATTTGTCCGTACAAGTCCCCTAGGTAGAGACAGACATTACAACAGGTATTGGTGGTTTCGTCGTGATGGGAGGATATTTGTAGAAAGCACTGATTCCAAGGAGTGGGGCTATTACAGCAGCAAGGAAGAGCTTGAGGCATTTGTGAAGACGCTGAATCGCAAGGGTGTGCGGGAAAGGGCATTGCACAAGCAACTGGAAAAATATTATAGTAGAATATGTTCACAACTTCAGAAGAAATCAAAGGAACAAATGCAGAAGATTGCAATAGATGAGTCTGTGCTCCGAAGGTCTACTCGAGTTCGAGCGCCACCTAGAGAAAATCCTGCCAATGCTTTCCTCAAATATGTTAACAAGTGGAAGGAAGAGTAG 2331 0.4144 MSGGTRRERERETSERKRERPLSFRTFRIYKRRALPSLQIFILHSHIPCDFTGDCHCLVAYYKMPLLKRKPFVLAEPPKDLEPHELVHQVRFTKEIFRDYHDYLNRINLYRQRVWTCKVTGKTNLTYEEAMVSEKRATEKVQQIPKELMAPALRIIQYSTLQLKELADAIAEKLQELVYVGAELHGKKDDGEHPCKILKVLKEGVDGLRYEVAWLDKNKSTIEKAEVSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHDELARNYGISTDIPEELKGRAFFNNGLLICKKKRKNEDVNGEAEDCKRKKLDHAKNNGSSLVKENGQCEKEPIKYPIDDLLVKPSPNDPVFADRPSPSRDFNVPVHCVGDLLMVWDFCSSFGRLLHLSPYSLEDFENSVCHKESNVVLLVESHAALLRVLLKNGGEYASAVEKRKRSHKIRMSNWQEYLCDFLEVINVPGFRQFEATIKRGHYGLVDIDAKLEILSELVNQVLESSIFREKLDEVIEQLNELGATRRGEALEDGRKRREEKERLKASFESNGGMDERCQTNGAAVSMKNNHSSQDGDIEKKRSGENESYMNGDALGGSMDMHSNGTSKRSSKKLSLELKEPAENGNASSRKESQKQLMGEKDPSDKNSIEQRREYFEREMEKLFVRTSPLGRDRHYNRYWWFRRDGRIFVESTDSKEWGYYSSKEELEAFVKTLNRKGVRERALHKQLEKYYSRICSQLQKKSKEQMQKIAIDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0517 776 MobiDBLite consensus disorder prediction 519 639 - -
Mibi09g0517 776 ProSiteProfiles DDT domain profile. 366 427 IPR018501 -
Mibi09g0517 776 SMART testlast3 366 427 IPR018501 -
Mibi09g0517 776 MobiDBLite consensus disorder prediction 519 541 - -
Mibi09g0517 776 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 656 722 IPR028941 -
Mibi09g0517 776 ProSiteProfiles WAC domain profile. 85 192 IPR013136 -
Mibi09g0517 776 MobiDBLite consensus disorder prediction 625 639 - -
Mibi09g0517 776 MobiDBLite consensus disorder prediction 544 563 - -
Mibi09g0517 776 Pfam DDT domain 367 423 IPR018501 -
Mibi09g0517 776 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 468 504 IPR028942 -
Mibi09g0517 776 MobiDBLite consensus disorder prediction 564 578 - -
Mibi09g0517 776 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 87 182 IPR013136 -
Mibi09g0517 776 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 64 774 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0517 464 721 Homeobox Transcription Factor Family AT5G44180 26.937 6.76e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mibi09g0517 WAC_Acf1_DNA_bd 1.1e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0517 09 6721504 6727961 Mibi09g0517 09 6721504 6727961 ECH