Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0516 ATGGCAACTTCTTTGCTCCGGCGAACCCATATCATCCGCAATGCTCGCCGCTTCAATCTTCAGCTGCTGACTCAGCATTTCCCGATCGATGAAGCAGTCAACGAAAATGCCACTCACAGAGTTCCAAAGGGCGTTTCTTTTTACTCTCAAATAGCCACTGGCGGTGGACTTCCTTCTTTTATGCGTGGAACAGTTTTCTGGGAATCTGGAAAACCTCTCTCTATTGAGGAATTTCATATCCCTCGCCCTAAGGCTGGAGAAGTTCTCGTTAGAACTAAGGCTTGTGGGGTATGCCATTCTGATCTCCATGTTATAAAAGATGAAATTCCTTTTACAAGTCCTTGTGTGCTGGGACATGAGATAACTGGCGAGGTTGTTGAACATGGACCTGTCACAGATAATAAAACGAAAGAAAGGCTTCCTGTTGGATCAAGAGTCGTTGGTTCCTTCATTATGCCTTGTGGCAACTGTTCTTACTGTTCAAAGGGGCATGACGATTTATGTGAAGAATTCTTTGCTTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGGTTGTTTCTTCGCAGCAGTGGAAAACCGGTTTACATGTATAGTATGGGAGGGCTAGCCGAATACTGTGTTGTGCCCGCAAATGCCTTGACAGTATTACCAGACTCATTGCCATATACTGAGTCTGCAATACTAGGCTGTGCTGTCTTTACTGCATATGGTGCTATGGCCCATGCAGCTGAGGTGCGTCCTGGGGATTCTGTTGCTGTTATTGGAACGGGTGGTGTTGGTTCAAGCTGTTTGCAGATTGCAAGAGCATTTGGTGCTTCTGAAATTATTGCTGTGGATGTACGGGATGATAAGCTAGAGAAATCGAAAACATTTGGTGCTACTCACACCGTGAATGCAGCACGAGAAGATCCAATTGGAAAGATAATTGAAATAACTGGTGGAAAAGGTGTTGACGTTGCTGTGGAAGCCTTGGGAAAACCACAGACGTTTTCCCAGTGCACACAAAGTGTGAAGGATGGGGGAAAAGCTGTGATGATTGGACTAGCACAAGCTGGTGCTGTAGGACAAATGGATATAAATCGCCTTGTCCGCAGAAAGATAAAAGTTATTGGATCTTATGGAGGTAGAGCAAGGCAAGATCTTCCTAAGTTAGTCAGACTGGCAGAATCAGGTATCTTCAATCTTTCCAATACTGTTTCTAGAAGGTACAGTTTTGAGGAGGCAGACAAAGCATTTGAAGATCTCAACCAGGGAAAAATTGTTGGACGAGCTGTCATTGAGATAAGATAA 1299 0.445 MATSLLRRTHIIRNARRFNLQLLTQHFPIDEAVNENATHRVPKGVSFYSQIATGGGLPSFMRGTVFWESGKPLSIEEFHIPRPKAGEVLVRTKACGVCHSDLHVIKDEIPFTSPCVLGHEITGEVVEHGPVTDNKTKERLPVGSRVVGSFIMPCGNCSYCSKGHDDLCEEFFAYNRAKGTLYDGETRLFLRSSGKPVYMYSMGGLAEYCVVPANALTVLPDSLPYTESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASEIIAVDVRDDKLEKSKTFGATHTVNAAREDPIGKIIEITGGKGVDVAVEALGKPQTFSQCTQSVKDGGKAVMIGLAQAGAVGQMDINRLVRRKIKVIGSYGGRARQDLPKLVRLAESGIFNLSNTVSRRYSFEEADKAFEDLNQGKIVGRAVIEIR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0516 432 Pfam Alcohol dehydrogenase GroES-like domain 86 216 IPR013154 -
Mibi09g0516 432 Pfam Zinc-binding dehydrogenase 261 392 IPR013149 -
Mibi09g0516 432 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 60 429 - -
Mibi09g0516 432 FunFam Alcohol dehydrogenase (Zinc) 65 250 - -
Mibi09g0516 432 Gene3D - 65 421 - -
Mibi09g0516 432 CDD Zn_ADH10 61 430 - -
Mibi09g0516 432 Gene3D - 238 375 - -
Mibi09g0516 432 SUPERFAMILY GroES-like 57 264 IPR011032 -
Mibi09g0516 432 SMART PKS_ER_names_mod 70 429 IPR020843 GO:0016491
Mibi09g0516 432 FunFam Sorbitol dehydrogenase 238 376 - -
Mibi09g0516 432 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 223 396 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0516 Mibi-ChrMibi09 6715539 6719597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0516 75 431 Monolignol Biosynthesis Gene Families AT4G37990 27.548 1.44e-20 90.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0516 09 6715539 6719597 Mibi09g0516 09 6715539 6719597 ECH