Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0501 ATGACTCGCGTTGGCTTCCCAGTTTTTTTCTTCGTCTTCCTTCTCATTTTAGCTTCTGAAGGGATGGGGAAGGAAGAAACTGAGGGCATCTGGAGACACCCATGCCGTGTTGCCAGCAAAAGGTTCAAAGGCATCTGCCTCAGCGACCGCAGCTGCGCAGGCGTCTGCATGACTGAAGGTCACACCGGCGGCGATTGCGGCGGTGTTCGCCGCCGTTGCCTCTGTTCCGTCCGCTGCTGA 240 0.5708 MTRVGFPVFFFVFLLILASEGMGKEETEGIWRHPCRVASKRFKGICLSDRSCAGVCMTEGHTGGDCGGVRRRCLCSVRC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0501 79 PRINTS Purothionin signature 34 49 IPR008176 GO:0006952
Mibi09g0501 79 PRINTS Purothionin signature 64 78 IPR008176 GO:0006952
Mibi09g0501 79 SMART gth_4 34 79 IPR003614 GO:0006952
Mibi09g0501 79 Pfam Gamma-thionin family 35 79 - -
Mibi09g0501 79 SUPERFAMILY Scorpion toxin-like 34 79 IPR036574 -
Mibi09g0501 79 Gene3D - 34 79 IPR036574 -
Mibi09g0501 79 PANTHER DEFENSIN-LIKE PROTEIN 1 8 75 - -
Mibi09g0501 79 CDD Knot1 44 75 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0501 Mibi-ChrMibi09 6472217 6472537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0501 13 79 Plant Defensins Gene Families AT2G02120 44.776 4.95e-14 59.3