Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0500 ATGGGTAGATCTCCATGTTGTGAGAAACAGCACACAAACAAGGGAGCATGGACCAAAGAGGAAGACCAACGCCTCATTAATTACATCTCCCTCCATGGCCAAGGCTCCTGGCGTTCCCTCCCCAAAGCTGCAGGTTTGTTGAGATGTGGGAAAAGTTGCAGACTTAGATGGATTAACTATTTGAGGCCTGATCTCAAGAGAGGCAATTTCACTGCTGAGGAAGATGACCTTATCATCAACCTTCACAGCTTACTCGGCAACAAGTGGTCTCTAATCGCAGCTAGGTTACCGGGAAGAACCGATAATGAGATAAAAAACTACTGGAACACTCACATCAAACGTAAACTCTACAGCCTCGGAATTGACCCTCAAACCCACCGCCCCCTCACCTCCTCCACCGCCACTCCGGCGATCACTGTTAACAAGAGAAAAAGCACCAATAATATCAACCCTAAAATAGAGAAGCCATCATCATTAGTGGTGTCATCATCAGGAGAAGATTCAACTAGCAATAGTAGCAGTGGTATTACCACAGATGAATCACCTAATTCTCATCATAATAATCATCATCAACAAGTCATCAACTTGGAGCTCTCTATAGGTCTTCCTGCAAACGACAATAATAAAACCCTCGTCGTTGACCATGCAGTCTCTGAAGACAAGTCATCAAAACGGCAACATGATAAAGAAGTGTGTTTGTGTTGCGGTTTAGGGTTTCCTCAGAACGATGTTGTTGTTATTGGTGGTGGTAGTAATAATGAAGTGTGTAGGTGCAAAGGCATGATGAGGAACACTTGTTCACTTATTACTACCCCACCTACTGCTTCTTCTTCTTCATCTGACATTCACGTTTTCAGTTTTTTCACTCCCTTCAATTCTTAG 882 0.4365 MGRSPCCEKQHTNKGAWTKEEDQRLINYISLHGQGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAEEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSLGIDPQTHRPLTSSTATPAITVNKRKSTNNINPKIEKPSSLVVSSSGEDSTSNSSSGITTDESPNSHHNNHHQQVINLELSIGLPANDNNKTLVVDHAVSEDKSSKRQHDKEVCLCCGLGFPQNDVVVIGGGSNNEVCRCKGMMRNTCSLITTPPTASSSSSDIHVFSFFTPFNS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0500 293 MobiDBLite consensus disorder prediction 124 189 - -
Mibi09g0500 293 SMART sant 66 114 IPR001005 -
Mibi09g0500 293 SMART sant 13 63 IPR001005 -
Mibi09g0500 293 FunFam Myb transcription factor 68 137 - -
Mibi09g0500 293 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi09g0500 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi09g0500 293 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi09g0500 293 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi09g0500 293 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 207 - -
Mibi09g0500 293 FunFam MYB-related transcription factor 13 66 - -
Mibi09g0500 293 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi09g0500 293 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi09g0500 293 Gene3D - 14 66 - -
Mibi09g0500 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi09g0500 293 Gene3D - 69 116 - -
Mibi09g0500 293 CDD SANT 16 61 IPR001005 -
Mibi09g0500 293 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0500 Mibi-ChrMibi09 6463601 6464914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0500 1 202 MYB Transcription Factor Family AT4G09460 63.810 4.00e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g0500 Myb_DNA-binding 1e-14 CL0123