Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0458 ATGCAAATCGATATTCTTGATGATTCTCCCTTCTTCCGCCTACAGATCCAAAACTTGGAAGAAAGTGCTGACTCATTAAGATCCAGATGTTATAAATTCTACAAAGGATGTCAAAAGTACACGGAGGGGCTAGAAAGGGAATACGATAGGGACATCGCATTTGCAAATGTCGTTGAAGCATTTGGAGGAGGGCCTAGTGATCCTTTTTTTGATGTTGTGGGAGGATCTGTAATTGCGAAATTCACTGTTGCTTTGAGAGAAATCAGTGCACACAAGGAACTGCTTCGGTCACAGGTGGAGCACATGCTGAATGACCGATTAATACAGTTTCTTAATGGCGACATCGTTGTTGCCAAGGAATCTCGTAGACGTTTTGACAAAGCCTCCATTCAGTATGAACAGATCATGATAGCCATGCAACTGGGTTTTGTGGTACAGGCACGTGATAAGTATACATCTTTGAGGAAAAGCGCCAAGTTGGATACTGTCGCTTCAGTAGAAGAGGAAATGCAAATTGCAAGGAACTCATTTGAGGAAGCCCGGTTTAACCTGGTTAGTGCTCTCAATCATATTGAGGCCAAGAAGAGGTTTGAGTTTTTGGAGGCTGTTCCTGGAATTATGGATGCTCATCTTCGATATTTTCAACAGGGATATCAACTATTCCAGCAGATGGAACCTTTCATCAGCGAGGTTCTAAGTGTTGCACAACAGTTAAGAGAAAATTATAATACGGAGCAGATTTCCCTTCTTGGAAGAATTCAAGAGTACAAAAAACAAACTCATCAAGATAGCAAGCACAGCTTGAATGGCCCTTCTCCTAATAGAGACATGCAGACTTTTTCTAGAATACCAAATGACGTGGCCGATGCTGTAATGGAATCTGCTGCAAATGGAACGGTTCAAATTCTTAGACAAGGATATCTGTCAAAACGATCTTCCAATCTGAGAGGGGCATGGAAGAGAAGGTATTTTGTTCTTGATAGTAGAGGAATGTTGTTCTACCATCGCAAACCAGGGAACTGGGTGCAATCGCACAGCGGCGGCCAATCATCTGCAACAAAGAATAATTCTGGTGAACCTAGTTCTGGGCTTTTGAGCCGTCTTGCTAATCACCATGCTGTTGTAGATGAAAAAAATGCCGCACGTCGAGCAGTGAACTTGCTAACATCAACAATCAAGGCTGATGCTGAACAGACGGATTTAAGATTTTGCTTCAGAATTATTTCACCAGCAAAAGCCTTGACATTGCAGGCAGAAAATTCGGCAGATCAAATGGATTGGATTGAGAAGATAACAGGAGTAATTGCCTCCTTATTGAATGCCCAAACAATAGAAATGCCCCCCTCAGTTGATTCTGAATCTAACGATGGTAACCCTGCCAGTAAGACCAATATGTTGGAAAATTCTCGAGTTGATGATCAGGTTGTAAAAGTTGAAAAGCCAATTGACATTCTTAGAAAGGTCTGCGGGAACGACAAGTGTGCTGATTGTGGGAAACCTGATCCAGACTGGGCATCCTTAAACCTCGGTATTCTTGTATGCATAGAATGTTCTGGTGTGCATCGTAATCTTGGTGTGCATATATCTAAAGTAAGATCGTTGACCCTAGATGTGAAAGTCTGGGATGCTTCTGTTTTGGGCATGTTTCAGTCGCTAGGTAATCTCTTTGCAAACTCAGTTTGGGAAGAGCTGTTGCATTCACCAAGTAATTCACAAGGAAATGATATGCCTGTTTCCTCATTCAAGGCCAGAACTAAATTGTTTCATGCAAAGAAACCAGAGCCTGATGACCCTATTTCATTGAAGGAGAGATTCATTCACGCAAAGATAGTTAAACAAGTCTTTGAAAGTCGTCAACTCAAAAACTCGGAGCTTATAATTTTCCACCTTAGGAAAACAGGAAACACACTTTACATTCTTACGAGGTGTGGGAAAGCATCCGTGCCAACGATAAGAGAGCGGTGTACCGACATATTGTCAAGTCAGATGTGGATCTCAACTTTATCTGTGAGCAAGTATCATATGGCATGTCTAACTGCCGATTCAAGCATGGTGGAGCTCCTTCTTCAGTATGGTGCAGATATAAATGCTCTAGATTCAAGAGCTAGGAGACAAAAGCCAGAAACTGATTCAGGCGCAAGCAATTGGGCCAATCCTAATGCTGTAGATAAAGAAGGCAAAACTCCTGTTGAGCTTGCTTCGAGATCTGAATCTATTGGCAGCGATGTTTTCTCTCTCTTATTAACAAGCAGATAG 2256 0.4202 MQIDILDDSPFFRLQIQNLEESADSLRSRCYKFYKGCQKYTEGLEREYDRDIAFANVVEAFGGGPSDPFFDVVGGSVIAKFTVALREISAHKELLRSQVEHMLNDRLIQFLNGDIVVAKESRRRFDKASIQYEQIMIAMQLGFVVQARDKYTSLRKSAKLDTVASVEEEMQIARNSFEEARFNLVSALNHIEAKKRFEFLEAVPGIMDAHLRYFQQGYQLFQQMEPFISEVLSVAQQLRENYNTEQISLLGRIQEYKKQTHQDSKHSLNGPSPNRDMQTFSRIPNDVADAVMESAANGTVQILRQGYLSKRSSNLRGAWKRRYFVLDSRGMLFYHRKPGNWVQSHSGGQSSATKNNSGEPSSGLLSRLANHHAVVDEKNAARRAVNLLTSTIKADAEQTDLRFCFRIISPAKALTLQAENSADQMDWIEKITGVIASLLNAQTIEMPPSVDSESNDGNPASKTNMLENSRVDDQVVKVEKPIDILRKVCGNDKCADCGKPDPDWASLNLGILVCIECSGVHRNLGVHISKVRSLTLDVKVWDASVLGMFQSLGNLFANSVWEELLHSPSNSQGNDMPVSSFKARTKLFHAKKPEPDDPISLKERFIHAKIVKQVFESRQLKNSELIIFHLRKTGNTLYILTRCGKASVPTIRERCTDILSSQMWISTLSVSKYHMACLTADSSMVELLLQYGADINALDSRARRQKPETDSGASNWANPNAVDKEGKTPVELASRSESIGSDVFSLLLTSR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0458 751 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 462 624 - -
Mibi09g0458 751 SUPERFAMILY BAR/IMD domain-like 4 324 IPR027267 -
Mibi09g0458 751 ProSiteProfiles PH domain profile. 301 436 IPR001849 -
Mibi09g0458 751 CDD PH_ACAP 304 440 - -
Mibi09g0458 751 SUPERFAMILY Ankyrin repeat 673 737 IPR036770 -
Mibi09g0458 751 Gene3D - 302 440 IPR011993 -
Mibi09g0458 751 Pfam BAR domain of APPL family 4 245 - -
Mibi09g0458 751 ProSiteProfiles Ankyrin repeat profile. 668 700 IPR002110 GO:0005515
Mibi09g0458 751 SMART 5bar 13 230 IPR004148 GO:0005515|GO:0005737
Mibi09g0458 751 Gene3D Arfaptin homology (AH) domain/BAR domain 3 262 IPR027267 -
Mibi09g0458 751 Gene3D Arf GTPase activating protein 460 623 IPR038508 -
Mibi09g0458 751 ProSiteProfiles ARF GTPase-activating proteins domain profile. 479 624 IPR001164 GO:0005096
Mibi09g0458 751 CDD BAR_SFC_plant 14 227 IPR035670 -
Mibi09g0458 751 SUPERFAMILY PH domain-like 302 455 - -
Mibi09g0458 751 ProSiteProfiles Ankyrin repeat region circular profile. 668 699 - -
Mibi09g0458 751 MobiDBLite consensus disorder prediction 702 737 - -
Mibi09g0458 751 SMART arf_gap_3 479 624 IPR001164 GO:0005096
Mibi09g0458 751 Gene3D - 673 751 IPR036770 -
Mibi09g0458 751 Pfam PH domain 303 435 IPR001849 -
Mibi09g0458 751 PRINTS HIV Rev interacting protein signature 491 510 IPR001164 GO:0005096
Mibi09g0458 751 PRINTS HIV Rev interacting protein signature 510 527 IPR001164 GO:0005096
Mibi09g0458 751 PRINTS HIV Rev interacting protein signature 533 554 IPR001164 GO:0005096
Mibi09g0458 751 CDD ArfGap 482 609 - -
Mibi09g0458 751 Pfam Putative GTPase activating protein for Arf 482 575 IPR001164 GO:0005096
Mibi09g0458 751 PANTHER CENTAURIN/ARF 6 747 IPR045258 GO:0005096
Mibi09g0458 751 MobiDBLite consensus disorder prediction 342 364 - -
Mibi09g0458 751 SUPERFAMILY ArfGap/RecO-like zinc finger 479 615 IPR037278 -
Mibi09g0458 751 SMART PH_update 302 438 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0458 Mibi-ChrMibi09 5952480 5962487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0458 491 615 C2H2 Transcription Factor Family AT4G21160 41.270 1.25e-20 92.0