Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0457 ATGGCATCATCGGAGGTATCAGTAAAAGGAAATGGTGTGAACGGAAAGGTGGAAGGCTTTTCTTCTGGTTATAACAACCATGACGATGTTAGGAACGGTACAGAGAGTCAAAATGCTCATACCTTAACCGCAAAAGAAGCAGAAGCTGCGCTTTACAGAGAGCTATGGCATGCTTGTGCTGGTCCTCTTGTTACAGTCCCCCGTGAAGGCGAGAGAGTCTTCTACTTCCCTCAAGGACACATAGAGCAGGTTGAGGCGTCGACCAATCAGGTGGCGGACCAGCATATGCCTGTGTACGATCTCCCTTCTAAAATCCCTTGTCGGGTGATCAACGTGTTGCTGAAGGCCGAGCCAGATACTGATGAGGTGTTTGCCCAGGTCACCTTGCTTCCTGAGACCAGTCCGCAAGATGAAAACGCCGTCGAGAAAGAATCTGCACCACCTCCACCTCCTCGATTTCATGTGCATTCTTTCTGTAAAACTCTGACTGCATCTGATACGAGTACTCATGGCGGCTTTTCTGTTCTGAGGCGACATGCTGATGAATGCCTACCTCCTTTGGACATGTCTAAGCAACCACCTACCCAGGAGTTAGTGGCAAAGGATCTGCATGGCAATGAGTGGCGATTCCGACATATCTTTCGTGGTCAACCGCGAAGACATTTACTTCAGAGTGGTTGGAGTGTTTTTGTCAGCTCCAAGAGGCTCGTTGCTGGGGATGCCTTTATATTTCTTAGGGGTGAGAATGGGGAGCTGCGTGTTGGTGTCAGGCGGGCAATGAGACAGCAGGGTAATATTCCATCCTCAGTGATCTCCTGCCATAGCATGCATCTCGGTGTCCTTGCAACTGCTTGGCATGCTATCTCAACCGGCACCATGTTCACTGTTTATTACAAGCCTAGGACAAGTCCAGCTGAGTTTATTGTTCCCTATGAACAATATATGGAGTCTCTAAAAAATAATTACACAATAGGGATGCGATTCAAAATGAGGTTTGAAGGTGAGGAGGCTCCAGAGCAAAGGTTTACTGGTACCATTGTTGGAATTGCGGATGGTGATACCAACAGGTGGCCAAATTCCAAATGGAGATGCCTTAAGGTAAGATGGGATGAAACTTCTAATATACCTCGCCCTGAAAGAGTTTCCCCTTGGAAAATAGAGCCTGCTGTTGCTCCTCCCGCTTTGAATCCTCTCCCGATGCCCAGGCCTAAAAGGCCTCGTACTAATGTGGTTCCATTATCCCCCGACTCCTCTGTTCTAACTCGAGAAGTTTCATCTAAAGTAAGTAAAGACCCTTCACTGGCAAGTGGGTTTCCAAGGGTCTTGCAAGGTCAAGAATACTCGACCTTGAGAGGCAATCTTGCAGAAAGCAATGAGTCTGTTACTGCAGAGAAGTCTGTTGTGTGGCCACCTGCAGCAGATGATGAAAAGATCGATATGGTTTCCACCTCAAGAAGGTATGGGTCAGAGAGCTGGATGTCAATTGGGAGGCATGAGCCAGCATACCCAGATCTACTATCAGGCTTTGGAGCCAGTGGAGATTCTTTCCGTCCACCTCTGGCTGATCAGACTGGCCCTCTGGCTATTCCCGCTAAAAAGCATCCGTTGGACCAAGAAGGGAGGTTTAATGGGGTGGCCAATCCATGGCCTGCAGGACCCTCTGGGCTATCACTAAACCTCCTTGACTCAAATATCAAGGGTTCTGTGAATGGTGGTGATGTAATGTATCAAACCCCAGGGAATCTAAGGTATGGTGCATTTGGTGAGTACTCTGTTCCCCATGGTCATAAAATCCAGCAGTTACATGGGAATTCGTTGATGCCGCCACCATCTACAACACAAAATGAGAGTTCTCGTTCAAGAGAGTTGATGTCGAAAGCTGTATCAGCACAAACAAGTGAGCCTGTCAAGCCAAAAGATGGAGATTATAAGCTCTTTGGCTTCTCACTTATCAGTAGCTCTGTCACACCAGAGCCATCTGTATCCCAGAGAAATGTGACGAGCGAGTCACCAGGTCACATGCATCCTGCATCTTACAAACCTCATGAAAGTGATTATAAATCTGAACAGCTGAGGGGCTCAAAACCAGCTGATGTAGCTGCTGTTGATGATCCAGAGAAGACATTGCAGCCATCTCAGACACAGCAAAAAGAGGTTCAAGCTAAACCCCCCAGTGGTTCTGCTAGGAGTTGCACTAAAGTACACAAGAAGGGAATTGCCCTTGGTAGGTCAGTGGACCTCACAAAGTTCAGCAACTATGAAGAATTAGTTGTTGAGCTAGACCAGCTGTTTGAATTTGGTGGTGAGCTGATGTCTCCTAAAAAGGACTGGCTTATTGTCTATACTGATGATGAGGGTGACATGATGCTTGTTGGAGATGATCCATGGCAGGAGTTCTGTGCCATGGTTCGCAAAATTTATATCTATCCCAAAGAGGAGATTCAAAAAATGAGCCCAGTTGCATCATCCAGCTTTGCTGCCTGA 2484 0.473 MASSEVSVKGNGVNGKVEGFSSGYNNHDDVRNGTESQNAHTLTAKEAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKIPCRVINVLLKAEPDTDEVFAQVTLLPETSPQDENAVEKESAPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNIPSSVISCHSMHLGVLATAWHAISTGTMFTVYYKPRTSPAEFIVPYEQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIADGDTNRWPNSKWRCLKVRWDETSNIPRPERVSPWKIEPAVAPPALNPLPMPRPKRPRTNVVPLSPDSSVLTREVSSKVSKDPSLASGFPRVLQGQEYSTLRGNLAESNESVTAEKSVVWPPAADDEKIDMVSTSRRYGSESWMSIGRHEPAYPDLLSGFGASGDSFRPPLADQTGPLAIPAKKHPLDQEGRFNGVANPWPAGPSGLSLNLLDSNIKGSVNGGDVMYQTPGNLRYGAFGEYSVPHGHKIQQLHGNSLMPPPSTTQNESSRSRELMSKAVSAQTSEPVKPKDGDYKLFGFSLISSSVTPEPSVSQRNVTSESPGHMHPASYKPHESDYKSEQLRGSKPADVAAVDDPEKTLQPSQTQQKEVQAKPPSGSARSCTKVHKKGIALGRSVDLTKFSNYEELVVELDQLFEFGGELMSPKKDWLIVYTDDEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPVASSSFAA 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0457 827 SMART B3_2 158 260 IPR003340 GO:0003677
Mibi09g0457 827 MobiDBLite consensus disorder prediction 1 40 - -
Mibi09g0457 827 Gene3D - 725 818 - -
Mibi09g0457 827 ProSiteProfiles B3 DNA-binding domain profile. 158 260 IPR003340 GO:0003677
Mibi09g0457 827 MobiDBLite consensus disorder prediction 676 692 - -
Mibi09g0457 827 SUPERFAMILY CAD & PB1 domains 732 806 - -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 18 40 - -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 131 150 - -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 604 632 - -
Mibi09g0457 827 CDD B3_DNA 156 258 IPR003340 GO:0003677
Mibi09g0457 827 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 818 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi09g0457 827 ProSiteProfiles PB1 domain profile. 729 822 IPR000270 GO:0005515
Mibi09g0457 827 Pfam B3 DNA binding domain 158 259 IPR003340 GO:0003677
Mibi09g0457 827 Pfam AUX/IAA family 775 817 IPR033389 -
Mibi09g0457 827 Pfam AUX/IAA family 712 765 IPR033389 -
Mibi09g0457 827 FunFam Auxin response factor 725 818 - -
Mibi09g0457 827 FunFam Auxin response factor 156 260 - -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 600 641 - -
Mibi09g0457 827 Pfam Auxin response factor 284 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi09g0457 827 Gene3D - 321 392 - -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 654 733 - -
Mibi09g0457 827 SUPERFAMILY DNA-binding pseudobarrel domain 154 287 IPR015300 -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 395 416 - -
Mibi09g0457 827 Gene3D - 155 260 IPR015300 -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 707 727 - -
Mibi09g0457 827 FunFam Auxin response factor 321 393 - -
Mibi09g0457 827 MobiDBLite consensus disorder prediction 654 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0457 Mibi-ChrMibi09 5920317 5924577 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0457 1 819 B3 DNA Binding Superfamily AT5G62000 64.566 0.0 1053
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi09g0457 AUX_IAA 5.4e-05 CL0072