Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0454 ATGATTTCTGGAGTGAGCAGCGTCGCTTGGATGGACGAAAACATAGAAGGAGACAACAACTCTACTGCTCCTCCCTCTTCATGGCCCAACATGAACACCAGCAACACCATCATCATCGACACAAACCAAAACCAGACCCATTCTGGTTTCCTCCACAACAAAGACGACATGGATTCCCTTTGTTCTTTCAAACCCATCCTTGAAATGGACGACGATTGGTACATCCCCAACAACAATGGTATCATCCAAAACCAACAAGATATCACCAGAGACATCTCTTTCTCCCCCAACAACTTCATTGACCAAGACAATCTATTGCTCAACCCAGTGGATTCCTCCACTTCTTGTTCCCCATCCCCCAATGTTTTCAACAATCTCGACACATCTCAAATTCCCTACTTTCTTCCTCAAAAACCCACCTTACCACCTCTCCTCAGTGTCGTCCCTAGTGACAATCCCTTAAACCATGGCTTTGAAATGGGCTGTGATGTGGGGTTTCTTGAGCCTCAAGCTTCAAGTGCTGGCCTTTTGCAAGGCTTCACTGATTTCAGCTCAAATAATGAACAGATAAGCCTTCCTAATTTATGCCCAGATCCACAGCTCCCAAATTCGGGTATTATTATTCCTCCGCAGGTAACGGAAGGAGGATTTTCGGGTTTTCGGGGTTTCGAGGGAGGTGTTGGGAAACCGATATTCGTGAATAGACCCAAAATGCTGAGACCCCTTGAGTCATTACCACCGTCTGGAGCACAACCCACTCTGTTTCAAAAGAGAGTGGCTTTGAGGAAGAAGCTGGAGAGCAACAAGGATTGTGAGAATACGATGAGGACGGAGGAGGAGAACGAGAAGAAGAGGAAGATGGGAAGTAGCTGGGAAGAAGTTGAAGACATTAGCATTGATGGGTCTGCGTTGAACTATGATTCTGATGATTTCACTGAGAATACGATGAGGACGGAGGAGAATGGAAAGAATGGTGCTGCTGTGAATGGTGGCGATAAGAGGGGGAAGAAGAAGGGAATGCCTGCGAAGAATTTGATGGCTGAGCGACGTCGCCGGAAGAAGCTCAATGATAGGCTCTATATGTTGAGGTCTGTCGTTCCAAAGATTAGCAAAATGGACAGGGCTTCAATCCTTGGGGATGCAATTGAGTACCTCAAAGAACTTCTACAAAAGATCAATGACATCAACACTGAATTGGAGTCAACACCTCCTGGCTCTTCACTAAGTGCTCCTGCCCCCAGCTTTCACCCTCTGACACCTACTCCGCCTACATTACCCGGCCGTATCAAGGATGAACTTTGCCCAACCTCATTGCCAAGCCCATGTGGCCAGCCTGCAAGGGTAAGTCATGCCTATTCTGATATTATCGTGGACATATCAAATGCAAGCCCTAATAGATAA 1401 0.4668 MISGVSSVAWMDENIEGDNNSTAPPSSWPNMNTSNTIIIDTNQNQTHSGFLHNKDDMDSLCSFKPILEMDDDWYIPNNNGIIQNQQDITRDISFSPNNFIDQDNLLLNPVDSSTSCSPSPNVFNNLDTSQIPYFLPQKPTLPPLLSVVPSDNPLNHGFEMGCDVGFLEPQASSAGLLQGFTDFSSNNEQISLPNLCPDPQLPNSGIIIPPQVTEGGFSGFRGFEGGVGKPIFVNRPKMLRPLESLPPSGAQPTLFQKRVALRKKLESNKDCENTMRTEEENEKKRKMGSSWEEVEDISIDGSALNYDSDDFTENTMRTEENGKNGAAVNGGDKRGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDINTELESTPPGSSLSAPAPSFHPLTPTPPTLPGRIKDELCPTSLPSPCGQPARVSHAYSDIIVDISNASPNR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0454 466 Coils Coil 261 282 - -
Mibi09g0454 466 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 339 388 IPR011598 GO:0046983
Mibi09g0454 466 MobiDBLite consensus disorder prediction 316 341 - -
Mibi09g0454 466 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 250 438 - -
Mibi09g0454 466 MobiDBLite consensus disorder prediction 270 292 - -
Mibi09g0454 466 Pfam Helix-loop-helix DNA-binding domain 346 388 IPR011598 GO:0046983
Mibi09g0454 466 Gene3D - 333 402 IPR036638 GO:0046983
Mibi09g0454 466 SMART finulus 345 394 IPR011598 GO:0046983
Mibi09g0454 466 CDD bHLH_AtAMS_like 342 412 - -
Mibi09g0454 466 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 342 408 IPR036638 GO:0046983
Mibi09g0454 466 MobiDBLite consensus disorder prediction 397 414 - -
Mibi09g0454 466 MobiDBLite consensus disorder prediction 397 446 - -
Mibi09g0454 466 FunFam BHLH transcription factor 335 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0454 Mibi-ChrMibi09 5895583 5897662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0454 54 448 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 46.489 2.46e-78 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g0454 HLH 1.7e-09 No_clan