Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0452 ATGGCAAAACGGCAAAACCACGACCCTCCAATCATCAACCCTCTCCCACACCACCAGGGCAAAGACGGAGATAGAGAATTGGAAGTTGGATCTGAAGAGCCTGAGGCCCCATTGCCTCTCACTGCTACTTCCCGGGTTTTGTATATGTTGGGAGATATCGCTGCAGGGCCTGCGTTTAGGTTTACGCAATGGCTCGAATCGGTTCGTAAACGCACTGCCAAACATCACCGCTCTGGCTTCCCCAACCGCCTTACGAGGATTCCCGATGATATGCCTTCTAGTGCAGAAGGATCAATGGATGATCCCAAATGTGATTCACCTCCTGTGCAAACAACAGAACTTAGTTTGTGGGAAAGGCTTGGTAATGCTGCTCTGTTGGACATCGAATCTAGCTCTTTTTCTTGGGAGAGGCTCTCCTCTCTGCATCACACTGAACACAGCAGCAGCACCGAACATTCTGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGGGGAGTTGTCTTCTTTGCTTTCTTTAATCGCATTGGGAGTGATGATTCTTTTCCAAAGGAGGAAGCTGCTGTAATAAAAATATCATCATCAAGAATGGCAACACAATCTGAACGCCTTGGATATGAATTTGCCAGGTGGTTGGGAGTTCAAACTCCTCAGGCTAGAGTTGTTCACAATACCAGTCCAGAGTGGCTCCAAATAAAGGAAGCTGCAGAAAAAGCTAGAAATCGAGCACTTTCTGAAGGAGATGAAATTGGTGAAATGACTTGTTTAGAACTTTTGGAAGCGCTCGAGCTTAGTAGGTGCCTATTTTTTATGAGTTATATACATGGGTCACCTCTACTAGAAAGTTCAAGTGCATTTGAATCTCGGGAATCTGCTGAGAGAATAGCAGCAGCTCTTGGCAGGGTATTGATGTTAGACCTTGTCATCAGGAATGAAGATAGGCTCCCCTGCCGTCAGCTTAGATGGCGTGGGAATTCTGCAAATCTGTTGTTGGCTGAAAAGATGATGATGTCTGTAACTTCTAACTCACTTGAAAAAGCCTTAGATTCTGCCATGAATCAATATAGACCTAGGGTGATAAGGGCACTTCAAAAAGAAAGAAGATCAACTTCAGTAAGTATCAGATTGGGTCCTAATAATCCTGGATTGTTTTCACAGTCCTCTGATACCTCAGATATTTCAGAATCACCAACTTGTAGTGACACGAGCCTTGAAGGTCAAACTTCTGGTGAACCACAATGTACTGACATTGTGGCTATTGATTCTGGTGTTCCTCGCCGGCCCCCTGCTGGAAAACGGTCAGATGATCACGCTAATTACCCTAAGTTGGTTGAGTTACTGATCAATAGTTCTGGGTTTTGCTCTAACCTGTTACATGACATCACTGGAGGAAAATTAGGATCTCCTTCATTAGAAGAGATTAATACAACTTCTGATGTACATGCAACTGAGACAGCATCGGTAGTTCATGAGTTCCGTAGTGGTTTCCGGGCTGCTCTTAGAGATCTTCAGGGATTTCATATATTCCTACTTACACTACACCAAAAGCTTGATATCTTATTACGATCATTTATGAACATTATAAGCAAAATATCATCAGGGGAGTATGACAAAGAGGATTTGATGGTTCCTGATTCACCTTCACTACATGCTGGAGATGGTAGTTGTCCATCTCCAGCAAACAAGGATAGGCCTGTTATTGAAAACCCTCCAGATTGTGGTGATTTAGAATCACAAAGAACTGCTCCAAGAGCATCATGGCCAGGGAGTAAAGAAAACTGTGATTCTGCTTCTCCTATGTCAAGGGAAGGTTGGCATGGAAAGTCCTTTAAAGGAAGTGGAGATCCACTTCGTAGTAGTCTTCGCCTGACTGCAAAGTTACGTGACTTCCATAAATATGCAAAGGTTGATGCAGAGTCTAATAAAGAATTAGAGCAGTGGAACGAAACACTTAAAAGTGATGCCATCAAGCTATGCCAGGACAACAATTTCAATAGTGGATTTTTTGAGTGCAGCGATAATAACAGTGTTGTCGATGCATATGAACTGAAGGTCAGACTTGAGCACATTCTTGAAAGGATTGCATTAATCTCAGAGGCTGCGAATACAGAGAAGCCATCTGCTGTTACAAATAGTCTATTCATTGGTGGAGCACTGGCTGCGAGATCTGTATTCACACTGCAGCACTTGGGAATCACTCATATTCTGTGTTTGTGCACCAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGGTCTATTTGATTACAGAAATTTCTACGTCTGTGACGATGTTGATTGTAACATCAGCAGCATATTTGAAGAAGCCTGTGATTTTATAGATCATGTTGAACAGAAAGGCCAGAGAATTTTAGTTCATTGCTTTGAAGGGAAAAGCAGAAGCGTCACATTGGTCCTTGCTTACCTAATGCTCAGGAAGAAGTTCACTTTATTAGAAGCATGGAATACTCTGAAACGAGTTCATCGTCGAGCGCAACCCAATGACGGCTTCACAAAGATCTTACAGGAACTGGATAAGAAACTGCACGGGAAGGTTTCCATGGAGTGGCAGCAAAAGAAACCAATGATGAAGGTTTGTCCAATATGTGGGAAAACTGCGGGACTAAGCAGCAGCTCGCTTAAGCTTCATCTGCAGAAATCCCATAAAAAACTATCGTCAGGGAGTGTGGACAGTGCCATGACAATGGAAATCCAGAAGGCTTTAACAGCTTTGAAAATTAGTCGTGGTGGTGGGAGTGTCAGCCCCACGCAAAGGCAGTCTAGTTCAATAGTGGATGAATGA 2811 0.4326 MAKRQNHDPPIINPLPHHQGKDGDRELEVGSEEPEAPLPLTATSRVLYMLGDIAAGPAFRFTQWLESVRKRTAKHHRSGFPNRLTRIPDDMPSSAEGSMDDPKCDSPPVQTTELSLWERLGNAALLDIESSSFSWERLSSLHHTEHSSSTEHSEDEMNKALEVTVNSGGVVFFAFFNRIGSDDSFPKEEAAVIKISSSRMATQSERLGYEFARWLGVQTPQARVVHNTSPEWLQIKEAAEKARNRALSEGDEIGEMTCLELLEALELSRCLFFMSYIHGSPLLESSSAFESRESAERIAAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLAEKMMMSVTSNSLEKALDSAMNQYRPRVIRALQKERRSTSVSIRLGPNNPGLFSQSSDTSDISESPTCSDTSLEGQTSGEPQCTDIVAIDSGVPRRPPAGKRSDDHANYPKLVELLINSSGFCSNLLHDITGGKLGSPSLEEINTTSDVHATETASVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDILLRSFMNIISKISSGEYDKEDLMVPDSPSLHAGDGSCPSPANKDRPVIENPPDCGDLESQRTAPRASWPGSKENCDSASPMSREGWHGKSFKGSGDPLRSSLRLTAKLRDFHKYAKVDAESNKELEQWNETLKSDAIKLCQDNNFNSGFFECSDNNSVVDAYELKVRLEHILERIALISEAANTEKPSAVTNSLFIGGALAARSVFTLQHLGITHILCLCTNEIGQSDSQFPGLFDYRNFYVCDDVDCNISSIFEEACDFIDHVEQKGQRILVHCFEGKSRSVTLVLAYLMLRKKFTLLEAWNTLKRVHRRAQPNDGFTKILQELDKKLHGKVSMEWQQKKPMMKVCPICGKTAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGGSVSPTQRQSSSIVDE 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0452 936 CDD DSP 709 846 - -
Mibi09g0452 936 SUPERFAMILY Protein kinase-like (PK-like) 63 440 IPR011009 -
Mibi09g0452 936 MobiDBLite consensus disorder prediction 542 619 - -
Mibi09g0452 936 Gene3D Protein tyrosine phosphatase superfamily 691 863 IPR029021 -
Mibi09g0452 936 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 708 853 IPR029021 -
Mibi09g0452 936 ProSiteProfiles Dual specificity protein phosphatase domain profile. 708 853 IPR020422 GO:0006470|GO:0008138
Mibi09g0452 936 MobiDBLite consensus disorder prediction 586 600 - -
Mibi09g0452 936 Gene3D - 281 378 IPR036940 GO:0016301
Mibi09g0452 936 MobiDBLite consensus disorder prediction 373 417 - -
Mibi09g0452 936 Pfam Dual specificity phosphatase, catalytic domain 725 848 IPR000340 GO:0008138|GO:0016311
Mibi09g0452 936 MobiDBLite consensus disorder prediction 75 109 - -
Mibi09g0452 936 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 25 935 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mibi09g0452 936 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 777 829 IPR000387 GO:0016311|GO:0016791
Mibi09g0452 936 MobiDBLite consensus disorder prediction 18 32 - -
Mibi09g0452 936 SMART dsp_5 708 850 IPR020422 GO:0006470|GO:0008138
Mibi09g0452 936 Pfam Actin-fragmin kinase, catalytic 113 372 IPR015275 -
Mibi09g0452 936 MobiDBLite consensus disorder prediction 1 38 - -
Mibi09g0452 936 FunFam Dual specificity protein phosphatase PHS1 680 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0452 Mibi-ChrMibi09 5850962 5863201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0452 19 921 Protein tyrosine phosphatase (PTP) family AT5G23720 65.351 0.0 1142