Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0448 ATGGCAGCTTTTTCTCATTGCTCCTTCCTCTTGTCATCTTTCAGCGACCATCCTCTCTTCAATTCCACTCTCTCTTCTTCCAACGACACCTCCCTCATGCCTCCCGTTAAGCTTGAAAATCCCCATGACGACGACGTCGTTCTCATGAAGAAGAAGAAGAAGAAAAGGGTAAATTACACAAATGGTCCTTCCAAGCAGGAGGGAACAGAGGGAAGAAGCAAGAAACAGAGGAAGAGCAAGAATACTAGTAGTAATAATGGTGGTGTGATTGTGAAACAAGATGGAAAGGAGAAAATTACACAAAAGCCCCCAACTGGCTATATCCATGTCAGAGCTAGAAGGGGTGAAGCAACCGATAGCCACAGCCTCGCCGAAAGGGTGAGAAGAGAGAAAATAAGTGAGAGGATGAAGATGTTGCAGCGACTCGTGCCAGGTTGTGATAAGTTTTTGTCAATGAAGCTTGCTTCTGTGAATGCCACCATGTTTGGAGACTTCACTATGGGCCAAGATGCCCTCATGGGAACTCCAGATCCACAGTTTTACTTCAAGGATCCAGATCAAATGATGTCTTCACTTCCATGGATGTTGTAA 591 0.4518 MAAFSHCSFLLSSFSDHPLFNSTLSSSNDTSLMPPVKLENPHDDDVVLMKKKKKKRVNYTNGPSKQEGTEGRSKKQRKSKNTSSNNGGVIVKQDGKEKITQKPPTGYIHVRARRGEATDSHSLAERVRREKISERMKMLQRLVPGCDKFLSMKLASVNATMFGDFTMGQDALMGTPDPQFYFKDPDQMMSSLPWML 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0448 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 116 166 IPR011598 GO:0046983
Mibi09g0448 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 148 IPR036638 GO:0046983
Mibi09g0448 196 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 50 148 IPR024097 GO:0006355
Mibi09g0448 196 MobiDBLite consensus disorder prediction 25 92 - -
Mibi09g0448 196 Gene3D - 107 160 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0448 Mibi-ChrMibi09 5797922 5799360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0448 60 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 45.946 4.81e-29 107