Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0446 ATGAAAGAATCAGAGAACGACATTCTCAACGTCTCCATTCACCTCCTTTCTTCTCTTCTCGACGATATCCCCACTGTGGTTCACTTCAAAGGCAAATGGTCTCTAATCAGAGCCAAACTCATCGATCTCCAAACCCACCTCTCCGATTTCTCCTCCGAATTCCCAAACTACCCCTCCAACCCTCTCTCCCTCGACCTCCTCCACTCCATCTCCCTCTCCCTCAACGACGCCGTTTCCCTCTCCTCACAATCCCACTCCCCCAATAACCTCCCCCAAGGCAAACTCAAAACCCAGAACGACATCGATTCCCTCCTCGCCAAACTCGACCGCCATGTTAAGGACTGTGACATTCTTTTCAAAAGTGGGGTTTTGCAAGATTCCATTTTTACCAATTCTAGTGCGTCTAAGAGAGAGGCCGTACGGTGTGAGTCCAGGAATTTGATCACTCGTTTGCAGATTGGGTCTGCGGAGAATAGGATGTTGGCGATGGATTCTTTGTTGGGTTTGCTTGAGGAGGATGATAAGAATGTGATGATTGCTGTGGCTCAGGGTGTGGTTCCTGTGCTTGTGAGGTTGATGGATTCTGCGGATTTTGAGATGAAGGAGAAGACTGTTGCTGCTATCTCCAGGGTCTCCATGGTGGATAGTAGTAAGCATGTTTTGATTGCTGAGGGTTTGTTGCTTTTGAATCAGTTGGTTAGAGTTCTTGATTCTGGTAGTGGATTTGCCAAGCAGAAATCTTGTATTGCTCTTCAGGCTCTTAGTTTTTCTAAGGAGAATGCTAGAGCAATTGGGTCTGGAGGTGGGATCTCTTCACTTTTAGAGATTTGTCAGGCTGGCACACCTGGTTCACAGGCTTTTGCGGCAGGGGTTTTGAGGAATCTCTCTGTGTTTCCTGAGATTAGAGAGAATTTTATTGAGGAAAACACCGTTGTTGTTCTGTTGGGGCTTGCTTCTTCGGGGACTGTGTTGGCGCAAGAGAATGCGATTGGGTGTTTGTCCAATTTGGTTTCTGAGGACGAAAGTTTGAAACTTTTGTTTGTGAAGGAAGGAGGGATCGAGTGTTTGAAGAATTTTTGGGACTCGGCTCCTGCAGTTAGAAGTCTTGAGGCTGCAGCTGAGTTGTTGAGTCACCTGGCTTTGAATTCACCGATTGCTGATGTTCTTGTTTCTGATGGGTTTATACTCCGCCTTGTGGGTGTGTTGAATTGTGGGATTCTAGGGGTGAGAATTGCGGCAGCTCGATCTGTTTATGCTATGGGGTTGTACAACACGAAATCGAGGAAGGAGATGGGTGAATGTGGATGTATGACCCCATTGATCAAGATGCTGGATGGCAAAGCTGTAGAAGAGAAAGAAGCAGCTGCAAAAGCCTTGTCGGTGCTCATGTTGTATGCTGGCAATAGGAAAATTTTCCGGAAGGATGAGAGGGGTATAGCTAGTGCAGTTCAGCTGTTGGATCCTTCAGTACAGAATTTGGACAAAAAGTATCCTGTTTCAGTGCTGACATCGCTTGTGCATTCAAAGAAATGCAAGAAACATATGGTGGCAGCTGGTGCTTGTGTATATACGCAGAAACTTGTTGAGATGGATGTTGAGGGTGCCAAGAAGCTCTTGGATAGCCTTGGTAGTGGTAAGATATGGGGTGTTTTTGCAAGACCCTAA 1665 0.4649 MKESENDILNVSIHLLSSLLDDIPTVVHFKGKWSLIRAKLIDLQTHLSDFSSEFPNYPSNPLSLDLLHSISLSLNDAVSLSSQSHSPNNLPQGKLKTQNDIDSLLAKLDRHVKDCDILFKSGVLQDSIFTNSSASKREAVRCESRNLITRLQIGSAENRMLAMDSLLGLLEEDDKNVMIAVAQGVVPVLVRLMDSADFEMKEKTVAAISRVSMVDSSKHVLIAEGLLLLNQLVRVLDSGSGFAKQKSCIALQALSFSKENARAIGSGGGISSLLEICQAGTPGSQAFAAGVLRNLSVFPEIRENFIEENTVVVLLGLASSGTVLAQENAIGCLSNLVSEDESLKLLFVKEGGIECLKNFWDSAPAVRSLEAAAELLSHLALNSPIADVLVSDGFILRLVGVLNCGILGVRIAAARSVYAMGLYNTKSRKEMGECGCMTPLIKMLDGKAVEEKEAAAKALSVLMLYAGNRKIFRKDERGIASAVQLLDPSVQNLDKKYPVSVLTSLVHSKKCKKHMVAAGACVYTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0446 554 Pfam Armadillo/beta-catenin-like repeat 173 209 IPR000225 GO:0005515
Mibi09g0446 554 SUPERFAMILY ARM repeat 146 492 IPR016024 -
Mibi09g0446 554 Gene3D - 363 530 IPR011989 -
Mibi09g0446 554 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 552 - -
Mibi09g0446 554 Gene3D - 133 362 IPR011989 -
Mibi09g0446 554 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 184 226 IPR000225 GO:0005515
Mibi09g0446 554 SMART arm_5 424 464 IPR000225 GO:0005515
Mibi09g0446 554 SMART arm_5 257 297 IPR000225 GO:0005515
Mibi09g0446 554 SMART arm_5 340 381 IPR000225 GO:0005515
Mibi09g0446 554 SMART arm_5 173 213 IPR000225 GO:0005515
Mibi09g0446 554 SMART arm_5 298 338 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0446 Mibi-ChrMibi09 5736128 5737792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0446 140 410 U-box Gene Family AT2G23140 28.467 3.01e-15 77.0