Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0445 ATGGATGACGGCTGCCAGCATGAAAATGGTAGGCATAAGGTGGACTATTACAGAGGAGCGCATTCCCCGTGGAATATGGCTCCTCAACATCAAGCAAAGGAACCAAATGCCTTAGTTATGAATAAGAAAATTATGTCCATCATAGCTGAAAGGGAGGCTGCTATTCGAGAGCGAAATGCAGCTTTATCCGAAAAGAATGATGCATTGGCTGCTCGAGATGAAGCCCTTCGGCAGAGGGATGAAGCACTTGTTCAGAGGGATAATGCCATAATGGAACGAGATAATGCCCTTCACGCCCTTCAAATCCGGGACAATGCTGTCAACTTCCAATTGGGTGGTGGAATTCAACGTGGATCAAAGCGAATGCACCATTCCACAAACCATCTTGTCGAAATGGCGGAAGCTGCATACAGCACGAAGGATACCACCATAACTGAGGCCTTCCCAGTGACTGTAATAGATTCTGAAGCCGTTAAATCTCATCAGGCAAAGAGAAAAAAGGTAGACAGGGCACTTTCTTCTAAGGCGTTGAAGAGCAAAGGAAAGAAAATGGGTGAGGATTTAAATAGGTCAGCTTCTTGTGAAGGGACTAAAATAAAATCTGAGTGGGATAGACAGGATGTTGGCTTGAATTTGGTGACATTTGATGAAACTACCATGCCGGCCCCAGTTTGCACATGCACCGGAGTAGCACGGCAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCATCCTGTTGCACCACCTCCTTGTCGATGTATCCATTACCACAGCTTCCAAACAAGCGCCATTCTCGAATCGGTGGCCGAAAGATGAGTGGAAGCGTATTTACAAGACTGCTGAGTAGGGTAGCAGCAGAGGGGCAGGATTTATCTATACCATTGGATCTCAAGGATTACTGGGCCAGACATGGAACAAATCGCTACATCACAATCAAGTAG 942 0.466 MDDGCQHENGRHKVDYYRGAHSPWNMAPQHQAKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNDALAARDEALRQRDEALVQRDNAIMERDNALHALQIRDNAVNFQLGGGIQRGSKRMHHSTNHLVEMAEAAYSTKDTTITEAFPVTVIDSEAVKSHQAKRKKVDRALSSKALKSKGKKMGEDLNRSASCEGTKIKSEWDRQDVGLNLVTFDETTMPAPVCTCTGVARQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSIPLDLKDYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0445 313 SMART GAGA_bind_2 1 313 IPR010409 -
Mibi09g0445 313 PANTHER - 1 313 IPR010409 -
Mibi09g0445 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0445 Mibi-ChrMibi09 5726405 5727445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0445 1 313 BBR or BPC Transcription factor family AT2G21240 59.554 1.83e-134 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mibi09g0445 GAGA_bind 2.2e-100 No_clan