Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0444 ATGGGTTGCGTCCTCGCAACGCCGTCGTACGGCAGAGGCCAAAGCTCCGATTCCAGACCTGAAAATCACCGCCGTCGTTCTAACCAGCGACATTCTGTCACTGACGGAGGTAATGCCGTTGTGGTTAGGAAGGTGAAGGAGAAGCAGAATCAGCGGACTAGGCATACCGGCGATTTCCCCGGCACTGTTCCGGCGACGGAGTTACGGAAGCTTAAGCTTGATCCTACCGCTAAATCCGAACATGGTTGGCCCTCGTGGTTGATCGATGTGGCTGGTGATGCTATCCGAGATTGGTCTCCTCGTCGCGCCAATTCCTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTATAAAGCTAGGGACCTTGTTACTGGAAAGATTGTGGCATTGAAGAAAGTTAGGTTTGATAATATGGAGCCTGAGAGTGTGAAGTTCATGGCTAGGGAGATTATTCTGTTGAGGCGGCTTGATCACCCCAATGTCTTGAAACTTGAAGGTTTGGTTACTTCAAGAATGTCATGCAGTTTGTACTTAGTATTCGAGTACATGGAACATGATCTTGCTGGGCTTGCTGCTCGCCAAGGTGTCAAGTTTACTGAGCCTCAGGTGAAATGCTATATGAAGCAGTTACTCTCTGGCCTTGAGCATTGCCACAGTCGAGGTGTTTTGCACCGTGATATCAAGGGTTCCAATTTACTCATTGATAATGAAGGAATCCTTAAAATAGCCGATTTTGGCCTAGCTTCTTTCCATGATCCTGAGAAAAAGCAGCCCATGACGAGTAGAGTTGTTACCCTTTGGTACCGGCCTCCTGAGCTTCTTCTTGGGGCTACACTCTATGGTGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATCTTGGCTGAGCTGCTTGCTGGGAAGCCAATTATGCCCGGCCGAACAGAGGTTGAGCAACTGCACAAAATTTTTAAATTATGTGGCTCACCATCTGAGGAATATTGGAAGAAGTACAGATTGCCAAATGCTACACTCTTTAAGCCACAGCAGCCCTATAAACGTTGCCTTTCAGAAGCCTTCAAAGATTTCCCGCCGTCTTCTTTACCTCTGATAGAAACTTTGCTTGCAATAGACCCAGATGATCGTAGCACTGCCTCAGCTGCTCTGACTAGTGAATTCTTTGCAACTGAGCCCTATGCTTGTGAACCTTCAAGTTTACCGAAGTATCCTCCCAGCAAAGAACTGGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCAAAAAGCTCAAAGTGGGAAAACTAATGCTGTTGATGGTGCTCGAAGAGTCAAAACACGTGACCGTGGTCGGGCCATTCCAGCCCCCGATGCCAATGCTGAGTTGCAAACAAACATAGATAAGTGGAGAGTTGTGACTCAGGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCTCCACATCAGGATGGAGCTGTTGGGTATCCATTAGATTCATCCCATAAAGGACCTGTGTCATTTGGTACCACTGATTCTTCCTTTGGCTCAGCAATATTTAATTCAAAAGTATCATCAGAATCTGTTGGAAATCATGCTGCTACAAGACCTCACAGTCACAGAGGGAGGAAAACTAATAAAGCAGATTCCCAGATGGCGCCACCATGGAAATTTATGCGAGCCTTCAAACCAACATCAATAGGCCCATCAATGAACTTATTATTTCGGAGCAAATAA 1719 0.4642 MGCVLATPSYGRGQSSDSRPENHRRRSNQRHSVTDGGNAVVVRKVKEKQNQRTRHTGDFPGTVPATELRKLKLDPTAKSEHGWPSWLIDVAGDAIRDWSPRRANSFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNMEPESVKFMAREIILLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAARQGVKFTEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLASFHDPEKKQPMTSRVVTLWYRPPELLLGATLYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCLSEAFKDFPPSSLPLIETLLAIDPDDRSTASAALTSEFFATEPYACEPSSLPKYPPSKELDVKLRDEEARRQKAQSGKTNAVDGARRVKTRDRGRAIPAPDANAELQTNIDKWRVVTQANAKSKSEKFPPPHQDGAVGYPLDSSHKGPVSFGTTDSSFGSAIFNSKVSSESVGNHAATRPHSHRGRKTNKADSQMAPPWKFMRAFKPTSIGPSMNLLFRSK 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0444 572 FunFam probable serine/threonine-protein kinase At1g54610 189 430 - -
Mibi09g0444 572 MobiDBLite consensus disorder prediction 17 31 - -
Mibi09g0444 572 MobiDBLite consensus disorder prediction 1 38 - -
Mibi09g0444 572 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Mibi09g0444 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Mibi09g0444 572 MobiDBLite consensus disorder prediction 519 549 - -
Mibi09g0444 572 PANTHER CELL DIVISION PROTEIN KINASE 104 394 - -
Mibi09g0444 572 Gene3D Transferase(Phosphotransferase) domain 1 189 430 - -
Mibi09g0444 572 Gene3D Phosphorylase Kinase; domain 1 92 188 - -
Mibi09g0444 572 MobiDBLite consensus disorder prediction 421 443 - -
Mibi09g0444 572 ProSiteProfiles Protein kinase domain profile. 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0444 572 FunFam probable serine/threonine-protein kinase At1g54610 93 188 - -
Mibi09g0444 572 CDD STKc_CDK9_like 106 390 - -
Mibi09g0444 572 SUPERFAMILY Protein kinase-like (PK-like) 100 395 IPR011009 -
Mibi09g0444 572 Pfam Protein kinase domain 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0444 572 SMART serkin_6 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0444 Mibi-ChrMibi09 5721192 5725147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0444 98 426 Core Cell Cycle Gene Families AT5G10270 51.705 2.49e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi09g0444 Pkinase 5.7e-68 CL0016