Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0428 ATGGAGTGGAATATGAAAGAAGCTTCATGGGATTTGGCTGAAATAGATGAAGCAACTGGATTACCCAACATAGAAACAATTGATCATGGGTCAACTAGATTTGGAAGTTGTGGTAGAAGTAATAATAATAAAGGGGGATTTTCTGTGGATTTGAAGCTTGGTCAAGTGGGGAATTCTAGTAGTAATAATGAACCACCAGTTTTTACCAAATGGAAAGATGTTGTTGGAGTCTCCAAAATGATGTCTTCTTCTTCTTCTTCCTCCTCATCTTCTTCCTCAGCATCATCTAAGAGAGCTCGAGCTATTAACAATGGAGGAAGCCAGACAGTGTCATGCCTTGTGGATGGGTGCAATTCAGATCTTAGAAATTGTAGGGACTACCACAGACGCCATAAGGTGTGTGAACTCCATTCTAAGACCCCAGTGGTCACAATTGGGGGTCACAAGCAAAGGTTCTGCCAACAGTGTAGCAGGTTTCATTCATTGGAGGAGTTTGATGAAGGGAAGAGAAGTTGCCGGAAGCGATTAGATGGACACAACCGACGGAGAAGGAAGCCGCAGGCAGCAGAAGGGGTAGGGAGATGTGGAGGCTTTTTGACCAATCACCAACAAGGCAGCCACTTATTTCCATTCTCAAGCTCACATATGTATCCTTCCGGTGCTATGGCTCACCCTGCTTGGAATACAGATGTTATGCTTCACAATCATCACAATCATCATCATCATCATCATCACCACCACTTGGTTGATCATAAACAGGACCTTTTTCTGGGATCTTCATCTTCCTCATCATCCTATTCAACAGAACCAAATAACAACAAGACGCAGCAGCTAGCATTCCTACAAGGTGGTGATCACAACACAACAGTAACAATGGAGAGCAACCAAAGTAGCAATCAGCAATCTCTACTACCACAGACGTTTCTAAGAGCCACGCCATTATTGCCGGAAACTCCACTTCACGGTGGTGTTGGCCGCGGTGGGGACCACCATGACTCTCACTGTGCTCTCTCTCTTCTGTCATCCCCACAGACGCACACAAGTGGGAATGGTTTGAGCCAAATGGTGCAGTCTCATCATCAGTCCATTATGCAGCAGCAGCAGCACCAACCCTTAGGATTGAGCTTGTATGATCATGGCCTGGAGACTGTGGGTCCGGTCTTGGTTCACCATGCGAGCCACCAGTCTCCTTCGACTTTGTATAACATGAATGAGGCCCCTTCTTCTCCGTTTCCTTTTCATTGGGAATAG 1251 0.4572 MEWNMKEASWDLAEIDEATGLPNIETIDHGSTRFGSCGRSNNNKGGFSVDLKLGQVGNSSSNNEPPVFTKWKDVVGVSKMMSSSSSSSSSSSSASSKRARAINNGGSQTVSCLVDGCNSDLRNCRDYHRRHKVCELHSKTPVVTIGGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQAAEGVGRCGGFLTNHQQGSHLFPFSSSHMYPSGAMAHPAWNTDVMLHNHHNHHHHHHHHHLVDHKQDLFLGSSSSSSSYSTEPNNNKTQQLAFLQGGDHNTTVTMESNQSSNQQSLLPQTFLRATPLLPETPLHGGVGRGGDHHDSHCALSLLSSPQTHTSGNGLSQMVQSHHQSIMQQQQHQPLGLSLYDHGLETVGPVLVHHASHQSPSTLYNMNEAPSSPFPFHWE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0428 416 SUPERFAMILY SBT domain 110 188 IPR036893 GO:0003677|GO:0005634
Mibi09g0428 416 Gene3D - 103 173 IPR036893 GO:0003677|GO:0005634
Mibi09g0428 416 ProSiteProfiles Zinc finger SBP-type profile. 109 186 IPR004333 GO:0003677
Mibi09g0428 416 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 54 365 IPR044817 GO:0003677
Mibi09g0428 416 FunFam Squamosa promoter-binding-like protein 14 103 173 - -
Mibi09g0428 416 Pfam SBP domain 112 185 IPR004333 GO:0003677
Mibi09g0428 416 MobiDBLite consensus disorder prediction 81 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0428 Mibi-ChrMibi09 5440445 5443643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0428 1 416 SBP-box Gene Family AT5G50670 40.793 4.34e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi09g0428 SBP 2.3e-30 No_clan