Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0419 ATGTGGGATGCCCTGGACCTTATATTTACCAGTTTAATTCTAAATCATAAAACAAATGGAAAGAGGTTGATTCCATTTAAAGATGGAAAATATGTGTCGATATACGCCCTTGAAAGCGAAACGCTAACTGTCAAACCTTCATCTTCATCACCATCGAAATCTGAATTCCCTTCTCCAATGGAAAATCACCAGCAACAACAACCCCCACCTCCTTCCTCCGCATACCCACCTCAACCCCAACCTCCTCCTCCTCCTCCTTCCTCCACCACCTTCCACCACCTCCTTCACCAACAACAACAACAGCTTCACAATTTCTGGTCCACCCAACGCCACGAAATCGAGCACGCCAACGATTTCAAGAACCACCAGCTTCCCCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGATGTCCGCATGATCTCCGCGGAAGCCCCCATTTTATTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACAATCCGATCTTGGATCCACGCCGAGGAGAACAAGAGGCGTACCCTTCAGAAGAATGATATCGCCGCCGCAATCACCCGTACGGATATTTTCGATTTCTTGGTTGATATTGTCCCTAGGGATGAGATTAAGGACGAGGTTGGTCCTCAGCTTGGTGGGATTATGGCGGCGCCGCCTCCTCCTGCGAGTGGTGTTCCGTACTATTATCCGTCTATGGGCCAGCCTGCTGCTGGTGGTGGTATGATGATTGGGCGGCCCGCGGTGGACCCTACTGGATTGTACGGTCAACCGCCTTCGCAGGCGTGGCAGTCTGTGTGGCAGACGGCGCCGGATGATGGGTCGTATGGAAGTGGCGGCAGCAATGGACAGGGTAATCTTGATGGTCAGAGGTAG 876 0.5217 MWDALDLIFTSLILNHKTNGKRLIPFKDGKYVSIYALESETLTVKPSSSSPSKSEFPSPMENHQQQQPPPPSSAYPPQPQPPPPPPSSTTFHHLLHQQQQQLHNFWSTQRHEIEHANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEVGPQLGGIMAAPPPPASGVPYYYPSMGQPAAGGGMMIGRPAVDPTGLYGQPPSQAWQSVWQTAPDDGSYGSGGSNGQGNLDGQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0419 291 MobiDBLite consensus disorder prediction 42 62 - -
Mibi09g0419 291 SUPERFAMILY Histone-fold 84 195 IPR009072 GO:0046982
Mibi09g0419 291 MobiDBLite consensus disorder prediction 63 89 - -
Mibi09g0419 291 Gene3D Histone, subunit A 88 201 IPR009072 GO:0046982
Mibi09g0419 291 MobiDBLite consensus disorder prediction 257 291 - -
Mibi09g0419 291 FunFam Nuclear transcription factor Y subunit gamma 92 201 - -
Mibi09g0419 291 Pfam Core histone H2A/H2B/H3/H4 84 186 IPR007125 GO:0003677
Mibi09g0419 291 MobiDBLite consensus disorder prediction 250 291 - -
Mibi09g0419 291 MobiDBLite consensus disorder prediction 42 91 - -
Mibi09g0419 291 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 78 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0419 Mibi-ChrMibi09 5369968 5372784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0419 87 290 CCAAT-HAP5 Transcription Factor Family AT3G48590 81.159 7.15e-103 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi09g0419 Histone 1.4e-17 CL0012