Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0397 ATGGACCTCTCGGTGGAGTCTTCCTCCGCCGCTCATTTCTCCGGCCGTCGTCCTTCCACGACGGCGACGGCCACTTCGTCTTCTTCATTGTTATCTCCGACCGATGACGGCGGTCTCATTGGCCCTACGCCGCCATTCGTGATCGGGGTCTCTGGAGGTACGGCATCAGGCAAGACCTCTGTGTGTGATATGATCATTCAACAATTGCAAGATCATAGAGTGGTGTTAGTATGTCAGGATTCATTCTACCGTGGTTTAACAGAAGAAGAATTGAAACGCGTGCATGAGTATAATTTTGATCATCCTGACGCCTTTGATACTGAGGAACTTGTAGAGTGTATCAGCAAGCTCAAATATGGACAGTCTGTTCACGTGCCAGTATATGATTTTAAGACGCATAAGCGGTCGTCTGAAAAATTTACGCAGGTCAATGCATCTGAGGTAATCATTTTGGAGGGCATATTGGTCTTTCATGAACAACGTGTCCGCGACATGATGAATATGAAAATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCCCGCAGAATAAGACGGAATACTGTTGACAGGGGTAGAGATATCCACTCGGTACTGGAACAGTATTCAAAATTTGTTAAACCTGCCTTCGATGATTTCATTCTTCCAACCAAAAAATATGCCGATATCATAATACCTCGCGGGAAAGAGAATGTTGTAGCGGTTGACTTGATCGTTCAACATATCCGCACTAAACTTGGCCAACATAACCTCTGCAAAATATATCACAATTTGGATGTCATTAACTCTACGTACCAGATTAGAGGCATGCTCACTCTAATTCGTGACAAGAATATATCGAAGCACGACTTTGTTTTTTATTCAGATCGGCTTATTCGTTTGGTAGTGGAACATGGTCTAGGTCATTTGCCATTTACAGAAAAGCAAGTTATCACACCTACAGGATCAATTTACACTGGAGTTGATTTCTGTAAAAAATTGTGCGGGGTATCAGTCATTCGAAGTGGGGAAAGCATGGAGAATGCTTTACGCGCATGTTGTAAAGGAATTAAAATAGGAAAAATTCTCATCCACCGTGAAGGAGGTGATGAGACCCAGCTAATTTATGAGAAGCTTCCGAAAGATATTTCAGAGAGACATGTTTTCCTTTTGGATCCAGTGCTTGGTACAGGCAAATCAGCTAGCCAAGCCATTGAGCTTCTCATACGAAATGGAGTTCCAGAGTCCCATATAATATTCCTTAACCTCATCTCTGCTCCCGAAGGAATACACCGTGTGTTCAAACGTTTCCCATACCTGACAATAGTTACTTCGGAGATTGAAGTTGGACTAAATGAAGAGTTTCGAGTTATACCAGGATTGGGAGAATTTGGAGACCGCTATTTCGGTACTGACCAGTGA 1401 0.4311 MDLSVESSSAAHFSGRRPSTTATATSSSSLLSPTDDGGLIGPTPPFVIGVSGGTASGKTSVCDMIIQQLQDHRVVLVCQDSFYRGLTEEELKRVHEYNFDHPDAFDTEELVECISKLKYGQSVHVPVYDFKTHKRSSEKFTQVNASEVIILEGILVFHEQRVRDMMNMKIFVDTDADVRLARRIRRNTVDRGRDIHSVLEQYSKFVKPAFDDFILPTKKYADIIIPRGKENVVAVDLIVQHIRTKLGQHNLCKIYHNLDVINSTYQIRGMLTLIRDKNISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHREGGDETQLIYEKLPKDISERHVFLLDPVLGTGKSASQAIELLIRNGVPESHIIFLNLISAPEGIHRVFKRFPYLTIVTSEIEVGLNEEFRVIPGLGEFGDRYFGTDQ 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0397 466 CDD UMPK 47 245 IPR000764 -
Mibi09g0397 466 Pfam Uracil phosphoribosyltransferase 263 464 - -
Mibi09g0397 466 FunFam Uridine kinase 42 248 - -
Mibi09g0397 466 PANTHER URIDINE KINASE 45 375 - -
Mibi09g0397 466 FunFam Uridine kinase 249 464 - -
Mibi09g0397 466 TIGRFAM udk: uridine kinase 46 245 IPR000764 -
Mibi09g0397 466 SUPERFAMILY PRTase-like 248 465 IPR029057 -
Mibi09g0397 466 PRINTS Uridine kinase signature 177 187 - -
Mibi09g0397 466 PRINTS Uridine kinase signature 120 135 - -
Mibi09g0397 466 PRINTS Uridine kinase signature 191 202 - -
Mibi09g0397 466 PRINTS Uridine kinase signature 213 226 - -
Mibi09g0397 466 PRINTS Uridine kinase signature 45 62 - -
Mibi09g0397 466 PRINTS Uridine kinase signature 75 86 - -
Mibi09g0397 466 Pfam Phosphoribulokinase / Uridine kinase family 47 233 IPR006083 GO:0005524|GO:0016301
Mibi09g0397 466 Gene3D - 249 464 IPR029057 -
Mibi09g0397 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 238 IPR027417 -
Mibi09g0397 466 MobiDBLite consensus disorder prediction 1 34 - -
Mibi09g0397 466 Gene3D - 43 248 IPR027417 -
Mibi09g0397 466 MobiDBLite consensus disorder prediction 1 36 - -
Mibi09g0397 466 CDD PRTases_typeI 322 428 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0397 Mibi-ChrMibi09 5065243 5072550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0397 1 466 PRT Gene Family AT3G27190 75.523 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0397 09 5065243 5072550 Mibi09g0397 09 5065243 5072550 ECH