Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0392 ATGGCTACCTGTAGTTCTCTTTCGTTGTGTCCGTACAGCTTATATCGTCTCCCGCAACCTAAAAGGTTTCCCATTTTATGCTCGGTTGGCTCTTCTTCTCTCGTAGGTGTTGATGGATCTAAAGCACCCCGCAAAAGATCAAGAAAAATTGAAGGTCCTGGAAAAAGCATGGAAGACTCTGTTCAACGCAAGATGGAGCAATTTTATGAAGGATCTAATGGGCCACCTCTGCGAGTTCTTCCTATTGGTGGGCTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACCATGATCGTTATATCCTTATTGATGCTGGTGTCATGTTCCCAGACCATGATGAGCTTGGAGTTCAAAAGATTATACCTGATACGACATTTATAAGAAAATGGAGGCACAAGATTGAAGCAGTTGTTATAACGCATGGTCACGAAGATCATATTGGTGCGTTGCCTTGGGTCATACCAGCATTGGATGCCCATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAGAAAGCGTTTGAAGGAGCATGATATTTTTGTTCCATCAAGACTCAAAGTATTTCGAACAAGGAAGAAGTTTGTGGCCGGGCCATTTGAAATAGAGCCTATTAGGGTTACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCATACCGGGGACTGGAAGATTGATGAATCACCACTAGATGGTAAAGTTTTTGACCGTGAAGTTTTGGAGGAACTCTCTAAAGAAGGAGTAACATTAATGATGAGTGATTCAACAAACATACTTTCACCTGGAAGAACAATTAGTGAATCTTCGGTGGGAGACGCACTGTTAAGGCATATATCTGCTGCTAAAGGAAGGGTTATTACAACCCAGTTTGCATCAAATATACACCGTCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGTAGAAAAATGGTGTTTGTTGGCATGTCTTTACGGACATATCTAGATGCTGCGTGGAAGGATGGGAAGGCACCATTTGATCCGTCCACCCTGGTGAAAGTGGAGGATATTGATGCTTATGCTCCTAAGGATTTGCTGATTGTAACAACTGGATCTCAGGCAGAACCTCGTGCTGCCTTGAATATTGCATCATATGGGGCTAGTCATTCTTTCAAACTGACCAAGGAAGACATAATTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCTCGTGTGATGAAAATGATGAACCGTATATCGGAGATTGGATCATCAATAATTATGGGGAAGAATGAGGGGCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAGGAAGTACTTAGAATAGTGAAACCACAACATTTTCTTCCCATACATGGAGAACTCTTGTTCTTGAAGGAGCATGAATTACTTGGGAAGTCAACTGGCATTCGACACACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTAAGAAACCGAAGAGTCCTTTCCAATGGTTTTGTTTCCCTTGGAAAAGAGAATTTACAGTTGAAGTACAGTGACGGGGACAAAGCATTTGGTACATCAAGCGATCTCTTCATTGATGAAAGATTGAGAATTGCTTTAGATGGAATTATTGTGGTCAGCATGGAAATATTGCGACCTCAAAATAATGAGGGTCATGTTGAAGACACCTTAAAAGGAAAGATAAGGATTACCACAAGGTGCCTGTGGCTTGACAAAGGAAAGCTGTTGGATGCCCTTCATAAAGCTGCTCATGCTGCACTTTCAAGCTGCCCGGTAAACTGTCCATTGGCTCACATGGAAGGAACTGTATCTGCAGTATTGAGGAAGTTAGTGAGGAAGTATAGTGGCAAAAGACCAGAAGTTATTGCTATTGCCACAGAAAACCCTGCCGCCGTTCTTGCTGATGAGGTAAAAGCAAGGCTGTCAGGAAAATCGCATATGGGTCTTGGGATGCCATCTTTGAGAAAATCTGTGGATGGACGTACAGAGGCAAAGAAGTCCAGTAAAATGCCAATAAAAGGAGATGCTGGCGATGATGTTGAAGGACTCCTACCTGAGGAAGATATCCCTATCCCGAGTGGAACCAAGGGTGATTCCCCTGACTCTGAGGATTCAGGTGAATTTTGGAAATCATTCATCACACCTTCAGCCACAGAAAAGTCAGTCAAAGCTAACAATGGTTATATCCCACGAAAGCAGCAAGAGTCCCAGGCGATGAAAGATGATTCTGAAGACTCTGAAGAAGGCAAGTCTGAACCCAAGCCTTCGAAAACAATGAAGAGAAATAAGTGGAAACCTGAGGAAGTGAAGAAGCTGATTGATATGCGTGGGGAGCTTAACGAGAGATTTCAAGCTGTGAAGGGAAGAATGATCCTCTGGGAGGAGATATCTCAAAAGTTGTTAGCTGATGGTATCAACAGAAGTCCAGGGCAATGTAAATCTCTGTGGACTTCTTTGATGCAAAAACATGAGGAGATCAAGAATGGAAAGAGCAGCAAGAAAAGCTGGCCATATCTGGAGGACATGAACAGGATATTGTCGGATAACGAGGCGCTAGCAGCAAAATGA 2592 0.4275 MATCSSLSLCPYSLYRLPQPKRFPILCSVGSSSLVGVDGSKAPRKRSRKIEGPGKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDHDELGVQKIIPDTTFIRKWRHKIEAVVITHGHEDHIGALPWVIPALDAHTPIFASSFTMELIRKRLKEHDIFVPSRLKVFRTRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDREVLEELSKEGVTLMMSDSTNILSPGRTISESSVGDALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKMVFVGMSLRTYLDAAWKDGKAPFDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNIASYGASHSFKLTKEDIILYSAKVIPGNESRVMKMMNRISEIGSSIIMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLKYSDGDKAFGTSSDLFIDERLRIALDGIIVVSMEILRPQNNEGHVEDTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMEGTVSAVLRKLVRKYSGKRPEVIAIATENPAAVLADEVKARLSGKSHMGLGMPSLRKSVDGRTEAKKSSKMPIKGDAGDDVEGLLPEEDIPIPSGTKGDSPDSEDSGEFWKSFITPSATEKSVKANNGYIPRKQQESQAMKDDSEDSEEGKSEPKPSKTMKRNKWKPEEVKKLIDMRGELNERFQAVKGRMILWEEISQKLLADGINRSPGQCKSLWTSLMQKHEEIKNGKSSKKSWPYLEDMNRILSDNEALAAK 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0392 863 SMART sant 768 830 IPR001005 -
Mibi09g0392 863 MobiDBLite consensus disorder prediction 36 57 - -
Mibi09g0392 863 Gene3D - 772 832 - -
Mibi09g0392 863 Gene3D - 81 493 IPR036866 -
Mibi09g0392 863 Pfam Myb/SANT-like DNA-binding domain 769 853 IPR044822 -
Mibi09g0392 863 PANTHER RIBONUCLEASE J 1 863 - -
Mibi09g0392 863 ProSiteProfiles Myb-like domain profile. 764 828 IPR001005 -
Mibi09g0392 863 MobiDBLite consensus disorder prediction 666 688 - -
Mibi09g0392 863 MobiDBLite consensus disorder prediction 729 774 - -
Mibi09g0392 863 Pfam Metallo-beta-lactamase superfamily 90 234 IPR001279 -
Mibi09g0392 863 MobiDBLite consensus disorder prediction 41 57 - -
Mibi09g0392 863 CDD GT1 770 835 - -
Mibi09g0392 863 SMART Lactamase_B_5a 89 286 IPR001279 -
Mibi09g0392 863 MobiDBLite consensus disorder prediction 652 716 - -
Mibi09g0392 863 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Mibi09g0392 863 MobiDBLite consensus disorder prediction 743 774 - -
Mibi09g0392 863 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 471 IPR011108 -
Mibi09g0392 863 CDD RNaseJ_MBL-fold 80 491 - -
Mibi09g0392 863 Gene3D - 278 428 IPR042173 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0392 771 855 Trihelix Transcription Factor Family AT2G38250 35.632 3.68e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi09g0392 Lactamase_B 4.8e-11 CL0381