Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0388 ATGGGGTTTCATAACTTGGTCCTGCTTCTCTGTTTTGTTTCTTGGTTCTTGTGTTCTGTTTCTCAGTTACAATCATCTCAAACCCAGGTGCTTCTTCAGCTCAAGAAGCATTTGGAGTACCCAAAACAATTAGATATATGGAAGGATCGTTGGGCATCTTTTTGCACTTCTTCTTCACAAGTAAATGTCACGTGCCAAGGAAATTTCGTCACTGAGCTAAGCATAGTGGGTGATGCTAACCCATCAAAGGTTAGAGATTTTGATGGTTATCCTTTTCCTGGTCACACATTGTCAGGGAATTTCTCTATGGATTCTTTTGTGGCTACTCTTTCCAGGTTAACTAGCTTGAAAGTTCTTCGTCTTGTTTCTTTGGGCTTGTGGGGTCCACTTCCTAATAAAATCCAGAGACTATATGAGCTTGAACATTTGGACTTGAGCTCAAACTTCCTATATGGGTCAATTCCTCCAAAGATTTCTGCCATTGTGAACCTTCAAGTTCTTGAACTTGATGACAACTTCTTTAATGGTACAATTCCTGTTTTGTCCAATTGGTTGACTAATTTGACTGTTCTTGGCTTGAGTAATAACAGATTGAAGGGTCAATTTGGAGATTTTAGTGCTTTGAAATCCTTACAAGTGCTGGATTTGAGAGAGAATAGATTAGACTCTAAACTACCAAACATGCCAAAAGGGTTAATAAGGCTTTTTCTGAGCAAAAACTCATTCTCAGGTGAAATTCCCAAGCAGTATGGTCAGCTAAATAGGCTTCAACAGTTAGATATTTCATTCAATACACTCACAGGAACGCCTCCTTCTGAGATTTTCTCTTTGCCAAATATCACTTTCTTGAATTTGGCATCAAACTTGTTAAGTGGTTCCCTTCACAACAATCTAAAATGTGGCAGCAAACTCAGGTTTGTTGATATCTCACACAACAAGTTATTGGGTTTCTTGCCTTCTTGCCTGGGAACAGAGTCACAAAACAGGGTTGTTAATCTTGAAGGAAATTGCTTATCCTCTAAGTTTCAGCATCAGCATGCAGTATCATATTGCACAGAGGTTCGTGTGAAGAAGAACACTTTAAGAGTTGGAGCTTTAGTTGGTGTAATTGTTGGAGCTTTCTTAATAATTGTGGTTCTGGCTTTGGGAATTGTTGTGTGTGGACGGTTTTGCTCTAGAGGGATCTCAGAGCAGCATCTATTGAATAAAACAGTTCAAGATAGCTCTACAGCTTCAGTTGGGCTCTCCACTGAGATTCTGGCCAATGCAAGATTTATTTCTCAAGCTTCCAAGTTAGGCAAAGAAGAGTTGCCCAAGTGTCGACCCTATTCTTTTGAAGAGCTTAAGCAAGCTACAAATAATTTCCACGACTCTACCTTCATGGGTGAAAATTTATACGGGAAGCTTTACAGAGGAAAGCTAGAAAATGGGAAGCAAGTTGCAATAAGGAGCCTACCGCTGTCAAAAAAGTATTCGTTCAGGAATTTCAAACTCAGGTTGGATTTGCTTGCAAGGCTTCGTCATCCTCATTTGGTATCACTTTTGGGTCATTGCATAGATGGTGTTGTAGCAGAAAATAATGGCACAAGCATATTTCTCATATATGAATACGTTCATAATGGAAGTTTCCAGAGTTATCTATCTGGAACTAGTCCTGGCAAGGTTTTCAGTTGGTCCGAGAGATTGGCGGTTTTGGTTAGCATTGCCAAGGCAGTTCACTTTCTGCACACTGGGATGATACCCGGTTTCTTCAAGAACCGACTTAAAACGAACAATATATTGCTCAGTGAGAATTGGACGGCAAAATTGAGCGACTATGGATTGTCCATTATCTCAGAGGAAGCTGACATAATTGAGGTAACGGAAATGAAAAGATTAGAAGATGATATTTATAGCTTTGGGTTTATACTACTTGAGGCACTTCTTGGTCCTTCAGTATCTGCTGAAAAAGAATCAATTTTGCCGAATGTGATGGCGTGTTTCAGCAGTGAAGAAGGGTGGAAGAAGATAGTGGACCCGGTAGTGCAAGCAAGTTGCTGTCAAGAATCCTTGTCCATAGTGATTTCCATCACAAACAAAAGCATTTCAACTGAATCTTGGAGCCGACCTTCCATTGAGGATGTCCTTTGGAACTTACAGTATGCTTCTCAAATTCAAGGAACTGCTGGTGCAGCAGATCATCCATCAGTAACACAATTTTGA 2202 0.401 MGFHNLVLLLCFVSWFLCSVSQLQSSQTQVLLQLKKHLEYPKQLDIWKDRWASFCTSSSQVNVTCQGNFVTELSIVGDANPSKVRDFDGYPFPGHTLSGNFSMDSFVATLSRLTSLKVLRLVSLGLWGPLPNKIQRLYELEHLDLSSNFLYGSIPPKISAIVNLQVLELDDNFFNGTIPVLSNWLTNLTVLGLSNNRLKGQFGDFSALKSLQVLDLRENRLDSKLPNMPKGLIRLFLSKNSFSGEIPKQYGQLNRLQQLDISFNTLTGTPPSEIFSLPNITFLNLASNLLSGSLHNNLKCGSKLRFVDISHNKLLGFLPSCLGTESQNRVVNLEGNCLSSKFQHQHAVSYCTEVRVKKNTLRVGALVGVIVGAFLIIVVLALGIVVCGRFCSRGISEQHLLNKTVQDSSTASVGLSTEILANARFISQASKLGKEELPKCRPYSFEELKQATNNFHDSTFMGENLYGKLYRGKLENGKQVAIRSLPLSKKYSFRNFKLRLDLLARLRHPHLVSLLGHCIDGVVAENNGTSIFLIYEYVHNGSFQSYLSGTSPGKVFSWSERLAVLVSIAKAVHFLHTGMIPGFFKNRLKTNNILLSENWTAKLSDYGLSIISEEADIIEVTEMKRLEDDIYSFGFILLEALLGPSVSAEKESILPNVMACFSSEEGWKKIVDPVVQASCCQESLSIVISITNKSISTESWSRPSIEDVLWNLQYASQIQGTAGAADHPSVTQF 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0388 733 ProSiteProfiles Protein kinase domain profile. 455 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0388 733 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 538 731 - -
Mibi09g0388 733 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 232 356 - -
Mibi09g0388 733 Gene3D Phosphorylase Kinase; domain 1 418 537 - -
Mibi09g0388 733 Gene3D Transferase(Phosphotransferase) domain 1 538 726 - -
Mibi09g0388 733 Gene3D Ribonuclease Inhibitor 232 367 IPR032675 -
Mibi09g0388 733 Gene3D Ribonuclease Inhibitor 24 231 IPR032675 -
Mibi09g0388 733 SUPERFAMILY L domain-like 28 359 - -
Mibi09g0388 733 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 97 713 - -
Mibi09g0388 733 Pfam Protein tyrosine and serine/threonine kinase 461 617 IPR001245 GO:0004672|GO:0006468
Mibi09g0388 733 SUPERFAMILY Protein kinase-like (PK-like) 438 713 IPR011009 -
Mibi09g0388 733 Pfam Leucine Rich Repeat 140 156 IPR001611 GO:0005515
Mibi09g0388 733 Pfam Leucine Rich Repeat 303 322 IPR001611 GO:0005515
Mibi09g0388 733 SMART LRR_typ_2 253 277 IPR003591 -
Mibi09g0388 733 SMART LRR_typ_2 137 161 IPR003591 -
Mibi09g0388 733 SMART LRR_typ_2 208 231 IPR003591 -
Mibi09g0388 733 SMART LRR_typ_2 185 204 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0388 Mibi-ChrMibi09 4963870 4968241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0388 7 659 Miscellaneous Gene Families AT5G14210 50.143 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mibi09g0388 PK_Tyr_Ser-Thr 1.9e-17 CL0016