Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0385 ATGGCAGCAGGGTGGGACAATGTTTTGAAGAGAAGAGAATCTCAGAAATATAGTTCCAATAAGGAATTTGATCGTTATGGTAGTGGTTCTGCTGGCGTGGCAGTGCATCGATCTCGCACGTTTAAGAACGGTCGTAGATCCTCAGATTTTGAGGATTCAGGTCGTGGACGGATTGGGTCTTATGGTGAAGTTGTGGACGGTGAAAATGTTCATGCACCTCCAGAGAAGAGAAGAAAAATTTCTCCCATTTTATGGGACTTAGCAGAAAAGGAATTAAAACTATCTTCCAAGGATAAGACAGCGCAGGTGACTGCGTTGTCTCCCTTTTGTCCATCTCATCAAAGTTCTCATGGAGCCAGTGGTGTTTCTTATGGTGGAGCTGTTAATCCTGAGTCTCCTGCTGATTTCTCTTGTGGATTACCTCAAGGGCATACCAGCAATGAGAGCAATGAGGGTGAATATGCTGATCAGTCTGATAAGAAACATGTGCAAGGTTGGAATATCGCCATGTCAAGATGGTTGTCGGATGATTATTCCCCAAGCAACGAGTCCGATGAGGATTACATGCACGAGAAAGAGACATCAAGCCCAGAAAGTGGTGAATTCATATGTGATAGTTTAGAGGGCAAAAAATCTAGATCATCAAGAAATAGTGCAGGAGCTGATAGTTGCTGCCCTTCAAGTAAAGAAGATAATGATTCTGAAAAGGAGTTGCTTGATGACGACGATGAAACTTCTAATGTCACTCACCTTTCATCAGATCCTGAAGATGGTGGTTTAGTAGCTGTTCAGAGAAGCATAAACAGCATCCAGAGTTGCAGAAGTGTTTTGGAATTTGAAATGATCAAGAAAATAAATGAAGGAACTTATGGTATTGTCTATAAAGCTAAGGATAAGAAGACCGGTGAAATTGTAGCATTAAAGAAGGTAAAGATGAATATGGATCGTGATGGCTTTCCAATGTCCTCTTTGAGGGAAATAAATATTCTCTCGTCTTTTAATCACCCTTCTATTGTGGAGGTTAAAGAAGTGGTCATGGATGATTTTGATGGTGTTTTTATGGTAATGGAGTGTATGGAGTATGACCTTAAAGGGCTGATACAAATGATGAAGCGGCCCTTTAGTATAGGTGAAATAAAATGCATGATGATGAAACTTCTCAAAGGTGTCAAATATCTCCATGACAATTGGGTTCTTCACAGAGATTTGAAGACATCAAATATTCTGTTAAACAAAGATGGTGAGCTGAAAATATGTGACTTTGGTTTATCTCGTCATTATGGAAGCCCACTCAAGCCATATACTCCTCTTGTGGTTACTTTGTGGTACAGGGCTCCTGAGCTTCTGCTAGGTGCTAAAGAATACTCTACAGCGATTGATATGTGGTCAATTGGTTGCATAATGGCTGAGTTAGTTGCTAAGGCACCTCTATTCCGTGGAAAATCTGAAATTGAGCAGCTAAATAATATTTTCCAAACCCTGGGCACACCTAATGAGAACATTTGGCCAGGAGTATCCAAATTATCTGGATTCAAGGCCAATTTTGCTAAGCACCCGCACAATCTTCTGCGGAAGAAGTTTCCGGCTGCTTCCTTTATTGGATCACCTGTTCTTTCTGAATTGGGATTTGACTTGTTGAGCAAGCTTTTAACTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTACTTCATGACTGGTTCCATGAAGCCCCCCTTCCTAAAGCTGACTTCAATATCTCTTTACCTTCACAGCGCTGCTAG 1767 0.412 MAAGWDNVLKRRESQKYSSNKEFDRYGSGSAGVAVHRSRTFKNGRRSSDFEDSGRGRIGSYGEVVDGENVHAPPEKRRKISPILWDLAEKELKLSSKDKTAQVTALSPFCPSHQSSHGASGVSYGGAVNPESPADFSCGLPQGHTSNESNEGEYADQSDKKHVQGWNIAMSRWLSDDYSPSNESDEDYMHEKETSSPESGEFICDSLEGKKSRSSRNSAGADSCCPSSKEDNDSEKELLDDDDETSNVTHLSSDPEDGGLVAVQRSINSIQSCRSVLEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMDRDGFPMSSLREINILSSFNHPSIVEVKEVVMDDFDGVFMVMECMEYDLKGLIQMMKRPFSIGEIKCMMMKLLKGVKYLHDNWVLHRDLKTSNILLNKDGELKICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKAPLFRGKSEIEQLNNIFQTLGTPNENIWPGVSKLSGFKANFAKHPHNLLRKKFPAASFIGSPVLSELGFDLLSKLLTYDPEKRISAEAALLHDWFHEAPLPKADFNISLPSQRC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0385 588 ProSiteProfiles Protein kinase domain profile. 279 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0385 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Mibi09g0385 588 FunFam cyclin-dependent kinase G-2 isoform X1 264 360 - -
Mibi09g0385 588 SMART serkin_6 279 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0385 588 PANTHER CELL DIVISION PROTEIN KINASE 278 575 - -
Mibi09g0385 588 MobiDBLite consensus disorder prediction 213 227 - -
Mibi09g0385 588 Gene3D Transferase(Phosphotransferase) domain 1 361 580 - -
Mibi09g0385 588 MobiDBLite consensus disorder prediction 108 162 - -
Mibi09g0385 588 CDD STKc_CDC2L1 273 569 IPR045267 GO:0004674|GO:0005524|GO:0006468
Mibi09g0385 588 MobiDBLite consensus disorder prediction 108 122 - -
Mibi09g0385 588 MobiDBLite consensus disorder prediction 1 74 - -
Mibi09g0385 588 FunFam Cyclin-dependent kinase G-2 361 588 - -
Mibi09g0385 588 Pfam Protein kinase domain 279 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0385 588 MobiDBLite consensus disorder prediction 175 258 - -
Mibi09g0385 588 Gene3D Phosphorylase Kinase; domain 1 262 360 - -
Mibi09g0385 588 MobiDBLite consensus disorder prediction 183 212 - -
Mibi09g0385 588 SUPERFAMILY Protein kinase-like (PK-like) 278 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0385 Mibi-ChrMibi09 4940310 4942560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0385 270 575 Core Cell Cycle Gene Families AT5G10270 45.706 1.15e-85 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Mibi09g0385 Pkinase 4.9e-72 CL0016