Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0362 ATGGTGGGTTCATCAGCTCTTTCACCAGAGCCAAACTCAGAGGTATTTTCATGGCTAAAGTCTCTACCTTTGGCTCCTGAGTATCGCCCTACCTTGGCCGAGTTTCAAGATCCGATTTCATACATTTTCAAGATCGAGAAGGAAGCTTCCAAGTATGGAATCTGCAAAATTGTCCCCCCAGTTCCACCTTCTTCGAAGAAAACGGCAATTGCGAATCTTAATCGCTCGTTAGCTGCGAGAGCTGCTAATTCTGACTCTTGCAGCTCGAAATCACAGCCTACATTCACCACAAGGCAGCAGCAGATCGGGTTCTGCCCTCGGAAGCAAAGGCCTGCACAGCGTCCTGTGTGGCAGAGTGGGGAATATTTCACGTTTCAGGAGTTTGAAGCGAAGGCTAAGGCTTTTGAGAAGAGTTATCTCAAGAAATGGGCTAATAAGAAAGGTGGTCTTTCGCCTCTGGAGATTGAAACTCTTTATTGGAAGGCCACGGTGGACAAACCCTTTTCAGTGGAGTATGCTAATGATATGCCTGGTTCAGCTTTTGTTCCTGTGAGTGGGAGGAAATATAGGGAGGCAGGGGAGGGAATCACTCTTGGTGAGACTGCATGGAATATGAGGGGGGTGTCAAGGGCAAATGGGTCATTGTTGAAGTTTATGAAGGAGGAGATTCCAGGTGTTACATCACCAATGGTGTATGTAGCTATGTTGTTCAGCTGGTTTGCTTGGCATGCAGAGGATCATGACCTGCATAGCTTGAATTATCTTCATATGGGGGCAGGCAAGACTTGGTATGGTGTGCCTAGGGATGCTGCTGTGGCATTTGAGGAAGTGGTTAGAGTTCATGGGTACGGGGGAGAGATAAATCCTCTTGTTACTTTTGCTGTACTTGGTGAGAAAACTACAGTGATGTCGCCTGAAGTATTTGTTAGTGCTGGGGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGAGAATTTGTTGTCACATTTCCAAGAGCCTATCATACTGGATTTAGTCATGGATTTAATTGCGGGGAGGCAGCCAACATTGCTACACCTGAATGGTTGAGGGTTGCTAAAGATGCTGCTATTAGGAGGGCTTCAATAAATTATCCGCCCATGGTTTCGCATTTCCAGTTACTTTATGATCTTGCCCTGACTTTGTGTTCGAGAATCACTGGGGGCATCAGTGCTGAACCACGGAGTTCTCGGCTTAGAGATAAGAGGAAAAGTGAAGGGGAAACTGTGATTAAAGAACTATTTGTCCAGGATGTGTTACAGAACAATGACCTGCTTCATAGTCTTGGTAAAGGATCTACTATAGTACTTCTTCCTCGGAGCTCTTCAGATATTTCTGTTTGCTCAAAATTACGTGTTGGTTCCCAGCAACTGAAGGTGAACCCTGGGTTTTCTTTCACTGCATGCAATTCTGAGGGAGTGAATTTCTCTAAAGGTTTTGTTTCTGATGACCTGGTTTTCAGCAGAACAACACAAGTGAAAGGATTTTATTCAGTGAAAGAGAAGTTTGCTTCTTTGTGTGAAAGGAACAGGGTCTCCTCATTAAGCGTAAATGATAACATAGGATCTTCAAGTTCTGTGCCACTTCAAAGAGATTCTGAAAGAGAGACGGGCCAAGGGGATGGGTTATCAGACCAGAGACTATTTTCATGTGTCACTTGTGGTATATTAAGCTTTGCTTGCGTCGCTATTGTGCAGCCTAGGGAACCAGCTGCTAGGTACCTTATGTCAGCTGACTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTAAGCGTCGACAAGTTTACACATACCCATGGAGATGCAACTACGTCAGAGAAAAACACCTTTGCAGGATGGAAGGTCAAAAAAGCCCCCGACTATGATCTTGTTCAGTCTTCTGGATACCAAATACAGGCGGAAGATCAATCACATGAGGTAGCTGTACATACTAAAGGACAAAAGGAAGCATCAGCCCTTGGCTTATTGGCATCAGCATATGGAAATTCATCTGATTCAGAGGAAGATCAAGCTGACCCATGTATCGCAGTTCATGATAATGAATCTAATGTTACGAACATTCCACCAGGTGGTATATCTCAGAATATGTCTAGCTCGCCATCTCATCTCCAAGATTGCAATGCAAGTGCTGTCAGGGCTCATGGTGATTATGGGCAAAAAGCAAACTCAGAAGGTTGTGATACCACTTCAGGGACTGCATTTAAGAATACGAGTTGTAACTTGAATTTTTCTCAAGATATTCGTGAGGCTGAAACATCAGCGCTTTGTAACACTGGACGTCCCATTGATGATAGAAGTGCTTCATTGTTGCCACATTCTGACGAAGATTCATCTAGATTGCATGTCTTCTGTCTAGAGCATGCAGCTGAAGTGGAACAACAACTTCAACCAATAGGAGGAGCACACATATTACTCCTTTGTCATCCAGATTATCCCAAGGTCGAGGCTGAAGCAAAAAATGTGGCAGAAGAACTGGGTATTGATGGCATATGGAAGAATCTTGCTTACAGAAATGCCACACCAGAAGATGAGGAGAGGATCCAGGCGGCTCTGGATAGTGAGGAAGCTATTCCTGGGAATGCAGACTGGGCTGTAAAGCTGGGAATTAATCTTTTCTATAGTGCCAATCTTAGTCGCTCTCCTCTCTACAGTAAGCAGATGGCTTACAATTCTGTCATATATTATGCATTTGGCCGTAGTACTCCTGCAAGCTCACCCACAGAACCCAAGGTTTACCAAAGAAGGACCAGCAAACAGAAAAAGGTGGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCTATCAGGTCCATCCCCTTTTAGCTAAAAGAGATTCTGAGGATGATGAGGAGAAAATCTTGCATGGGTGGTTGTTGCCTGACAAGAAAATGGAGAGATCAGAAAGTGCCCACACGGAGTATTTTATTACTAGAAATCCTGCTAAGAAAAGGAAAACGACTGTAGAGAGTAGAAAAAACAGGAAATCCAGTTTTTCTGAGAGAGAATATGTTTCGGATAATTCTGTTGAAGAGAAATACAACCCACAGCAAAGGACATATTCTAGAAGCAAGCATGCCAAATATTTTGACAGAGGTGATGCAGTATCAGAAGAGGATTATTCCCCCCTGCAGCAATATGGAAAACCTACTAGAAAGCAAGCCAAATATAACGAAAGTGATGAAGGTTCAGGTGATTCAATGGATGATAATTCTCACATGCAACATGGAAGGAATTTTAAAGTCAAAGAACCTAAATTTATTGACAGTGGTGACATCTCAGATGATATGATGGGATATGATTCTGATTCACAACTGAGGAGAGAGCTTAGCAGTAAAGAAATTGAAGAATCAGAAAGAGATGGAATTTCAGAGGATTCGATGGGTGGTAATTCTCTTAAGCGGCAGAGGAAGACGTCTAGAAACAAGCCAGCCAAATATGTTGCAAAACAAGCGATTTCAGATGACCAAATGGAGGATAATTTTCCAAAGCAGCAAAGAAGAATTCCTAAAAGCAGACAAACCAAATACCTTGATGGAGATGTTATGGTATCTGATGACCAACTGGAGCATCGAATACACAAGCAGCAAAGATCCAAAGGCAGGCGAGCCAAATACCTTGCCAAAGAGGATATTACATCTGATGACCAACTGGAGGACCATTCTGGCAAGTGCCGTACAAGGATTCCTAAAAGCAGACAGGGTAAATGCCTAGTTGAGGAAGATGTATTGTCTGATGACCAATTGGAGGATCACTATCAGAAGCCACGTGGTACTATTCCAAAGAGCAGGCAAAATAAACGCAAGAATAAAGTTATGGTTGACTCATCTGATAATTATTCTCGTCTGCTGCATAGAACTCCTAAGAGGAAGCAAGTTAAAAGCATGGGCGAAGAAGACATAAATTCTGATGATCAAATGGAGGATTTATCTCATCAGCAGCGAAGGAGGATTCTTCGAAGCCAGCAATCTAAATTGGTGGCACAGCAAGAAGTGAAACGAGCTAACTCTTGCCGTATATCGCGGCCTCTAAAACGAAGTGCTCAGCTGCCAGTAAAACCAAAGACTTCTCAGAAAATGAAGCAGACTCCTCGAGTGCAGAAAAATCAACCTAGTAACTTTAGAGATTTTAACTTGTTTTCAGAAGAGGAGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGTACCAAAAGTCGAGGAGTCTGAAGCAAAACCAAAAGGAAAGGTAACCCAAAGGAAGAAGGTGAACAATGCTACAGCTTTGAAGGTTTCCAAAACAAAGGATGAGGAAGCAGAATATGAGTGTGATATTGAAGGTTGCACTATGAGCTTTGGCTCAAAACAGGAACTAGCAGTGCACAAGAGAAACATTTGTCCTGTAAAGGGATGCGGAAAGAAATTTTTCTCACATAAATATCTGGTGCAGCACCGCCGAGTTCATGAGGATGACCGCCCTCTGAGGTGCCCTTGGAAGGGCTGCAAGATGACCTTCAAGTGGGCATGGGCACGTACTGAGCATATTCGAGTGCATACTGGGGCTCGTCCATATGTTTGTGCTGAGCCAGGGTGTGGGCAAACTTTCAGATTTGTTTCTGATTTCAGTCGCCACAAGCGAAAGACTGGCCATTCAACAAAGAAGAGTCGTTAA 4671 0.4359 MVGSSALSPEPNSEVFSWLKSLPLAPEYRPTLAEFQDPISYIFKIEKEASKYGICKIVPPVPPSSKKTAIANLNRSLAARAANSDSCSSKSQPTFTTRQQQIGFCPRKQRPAQRPVWQSGEYFTFQEFEAKAKAFEKSYLKKWANKKGGLSPLEIETLYWKATVDKPFSVEYANDMPGSAFVPVSGRKYREAGEGITLGETAWNMRGVSRANGSLLKFMKEEIPGVTSPMVYVAMLFSWFAWHAEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAVLGEKTTVMSPEVFVSAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALTLCSRITGGISAEPRSSRLRDKRKSEGETVIKELFVQDVLQNNDLLHSLGKGSTIVLLPRSSSDISVCSKLRVGSQQLKVNPGFSFTACNSEGVNFSKGFVSDDLVFSRTTQVKGFYSVKEKFASLCERNRVSSLSVNDNIGSSSSVPLQRDSERETGQGDGLSDQRLFSCVTCGILSFACVAIVQPREPAARYLMSADCSFFNDWVVGSGVSVDKFTHTHGDATTSEKNTFAGWKVKKAPDYDLVQSSGYQIQAEDQSHEVAVHTKGQKEASALGLLASAYGNSSDSEEDQADPCIAVHDNESNVTNIPPGGISQNMSSSPSHLQDCNASAVRAHGDYGQKANSEGCDTTSGTAFKNTSCNLNFSQDIREAETSALCNTGRPIDDRSASLLPHSDEDSSRLHVFCLEHAAEVEQQLQPIGGAHILLLCHPDYPKVEAEAKNVAEELGIDGIWKNLAYRNATPEDEERIQAALDSEEAIPGNADWAVKLGINLFYSANLSRSPLYSKQMAYNSVIYYAFGRSTPASSPTEPKVYQRRTSKQKKVVAGKWCGKVWMSYQVHPLLAKRDSEDDEEKILHGWLLPDKKMERSESAHTEYFITRNPAKKRKTTVESRKNRKSSFSEREYVSDNSVEEKYNPQQRTYSRSKHAKYFDRGDAVSEEDYSPLQQYGKPTRKQAKYNESDEGSGDSMDDNSHMQHGRNFKVKEPKFIDSGDISDDMMGYDSDSQLRRELSSKEIEESERDGISEDSMGGNSLKRQRKTSRNKPAKYVAKQAISDDQMEDNFPKQQRRIPKSRQTKYLDGDVMVSDDQLEHRIHKQQRSKGRRAKYLAKEDITSDDQLEDHSGKCRTRIPKSRQGKCLVEEDVLSDDQLEDHYQKPRGTIPKSRQNKRKNKVMVDSSDNYSRLLHRTPKRKQVKSMGEEDINSDDQMEDLSHQQRRRILRSQQSKLVAQQEVKRANSCRISRPLKRSAQLPVKPKTSQKMKQTPRVQKNQPSNFRDFNLFSEEEEEGGPSTRLRKRVPKVEESEAKPKGKVTQRKKVNNATALKVSKTKDEEAEYECDIEGCTMSFGSKQELAVHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSR 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 989 1180 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1326 1342 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1297 1322 - -
Mibi09g0362 1556 FunFam Probable lysine-specific demethylase ELF6 1521 1550 - -
Mibi09g0362 1556 ProSitePatterns Zinc finger C2H2 type domain signature. 1466 1488 IPR013087 -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1209 1264 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1199 1420 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1107 1130 - -
Mibi09g0362 1556 ProSitePatterns Zinc finger C2H2 type domain signature. 1496 1518 IPR013087 -
Mibi09g0362 1556 SUPERFAMILY Clavaminate synthase-like 213 380 - -
Mibi09g0362 1556 ProSiteProfiles Zinc finger C2H2 type domain profile. 1494 1523 IPR013087 -
Mibi09g0362 1556 FunFam Probable lysine-specific demethylase ELF6 1491 1520 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 989 1015 - -
Mibi09g0362 1556 Gene3D Cupin 18 370 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1030 1044 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1166 1180 - -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1060 1097 - -
Mibi09g0362 1556 SUPERFAMILY beta-beta-alpha zinc fingers 1504 1548 IPR036236 -
Mibi09g0362 1556 Pfam JmjC domain, hydroxylase 230 348 IPR003347 -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1384 1417 - -
Mibi09g0362 1556 SMART c2h2final6 1441 1463 IPR013087 -
Mibi09g0362 1556 SMART c2h2final6 1464 1488 IPR013087 -
Mibi09g0362 1556 SMART c2h2final6 1524 1550 IPR013087 -
Mibi09g0362 1556 SMART c2h2final6 1494 1518 IPR013087 -
Mibi09g0362 1556 Gene3D Classic Zinc Finger 1414 1464 - -
Mibi09g0362 1556 Pfam jmjN domain 26 59 IPR003349 -
Mibi09g0362 1556 ProSiteProfiles Zinc finger C2H2 type domain profile. 1464 1493 IPR013087 -
Mibi09g0362 1556 SMART JmjN_1 24 65 IPR003349 -
Mibi09g0362 1556 SMART cupin_9 197 366 IPR003347 -
Mibi09g0362 1556 SUPERFAMILY beta-beta-alpha zinc fingers 1464 1500 IPR036236 -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 1357 1383 - -
Mibi09g0362 1556 ProSitePatterns Zinc finger C2H2 type domain signature. 1526 1550 IPR013087 -
Mibi09g0362 1556 Gene3D Classic Zinc Finger 1465 1548 - -
Mibi09g0362 1556 ProSiteProfiles Zinc finger C2H2 type domain profile. 1524 1555 IPR013087 -
Mibi09g0362 1556 MobiDBLite consensus disorder prediction 527 547 - -
Mibi09g0362 1556 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Mibi09g0362 1556 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 1490 - -
Mibi09g0362 1556 FunFam Probable lysine-specific demethylase ELF6 18 370 - -
Mibi09g0362 1556 ProSiteProfiles JmjC domain profile. 200 366 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0362 Mibi-ChrMibi09 4551425 4560994 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0362 1099 1555 C2H2 Transcription Factor Family AT3G48430 36.128 4.55e-72 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi09g0362 JmjC 1.1e-35 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0362 09 4551425 4560994 Mibi09g0362 09 4551425 4560994 ECH