Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0333 ATGGAGATGGAGCGCGTCTTTGAATTTCCTCATACTCACCTTGATCGTCGCCCGAGGAAAAGGCCGCGTTTGGGTTGGGACATTCCTGAGGTCCCTAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGAAATTTTTCAAGCTATGCATCTTCAAGGGGCCCCTCAGAGCTTACAAATAATTCTCTAAATGTTAAGGGAGTAGCTCGTAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATACATAGCAAAATGGGGGAAGGAACTTTTGGGCAAGTTTTGGAATGCTGGGACCGAGAACGGAAGGAGATGGTTGCAATTAAAATTGTTCGTGGGATAAAAAAGTATAGAGAAGCAGCCATGATAGAGATTGAGGTGCTGCAACAGCTTGGTAAACATGATAAAGGTGGCAATCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGCGAGATTGGCAGACAACTGTTGGAATGTGTAGCATTCATGCATGATTTGCGCATGATCCATACGGACTTGAAGCCAGAAAATATATTGCTAGTTTCACCAGACTATGTTAAAGTTCCTGACTACAGGAGCTCATCCAGATCACCAAGTTCTTATTTCAAGAGGGTGCCCAAGTCAAGTGCTATTAAAGTTATTGATTTTGGCAGCACCACTTATGAGCGAGAGGATCAGACGTACATTGTATCAACTCGGCATTACAGGGCACCCGAAGTTATACTTGGGCTTGGTTGGAGTTATCCATGTGATGTATGGAGTGTTGGCTGCATATTGATAGAGCTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAGAATTTGGAGCACCTTGCAATGATGGAAAGGGTGCTCGGTCCGTTACCACAGCACATGTTGAAGAGAGTAGACCGACATGCGGAGAAGTATGTCAGAAGGGGTAGATTAGATTGGCCAGAGGGGGCCACTTCTAGGGATAGTATTAAAGCTGTTATGAAGCTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGATCATTCAGCTGGAGATCTCATACATGTGTTGCAGGGGTTACTTAGATATGACCCTTCAGAAAGATTATCAGCTAGGGAGGCTCTAAGACATCCCTTCTTTACTAGAGATCACCTTAGGAGATAG 1293 0.4401 MEMERVFEFPHTHLDRRPRKRPRLGWDIPEVPKAQVGLFCGQDVGNFSSYASSRGPSELTNNSLNVKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSPDYVKVPDYRSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLSAREALRHPFFTRDHLRR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0333 430 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0333 430 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0333 430 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Mibi09g0333 430 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 426 - -
Mibi09g0333 430 FunFam Serine/threonine-protein kinase AFC2 174 423 - -
Mibi09g0333 430 FunFam Serine/threonine-protein kinase AFC2 85 178 - -
Mibi09g0333 430 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
Mibi09g0333 430 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0333 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Mibi09g0333 430 MobiDBLite consensus disorder prediction 1 24 - -
Mibi09g0333 430 CDD PKc_CLK 85 423 - -
Mibi09g0333 430 SUPERFAMILY Protein kinase-like (PK-like) 85 427 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0333 Mibi-ChrMibi09 4199075 4202481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0333 103 423 Core Cell Cycle Gene Families AT1G76540 26.269 1.73e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mibi09g0333 Pkinase 4.8e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0333 09 4199075 4202481 Mibi09g0333 09 4199075 4202481 ECH