LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi09g0332	ATGGCCTTCTCAAGCTATGGTGAAAGTTGGAGGCAAAAGAGGAAGCTTTGTGTACTTGAACTCTTAAGCTTGAAGAGGGTACGTTCGTTTCAATTCATAAGGGATGATGAAATCCAAGATTTGATTAGTAACATAAGAAAATGCTACTCGAGGAGCAATAATAATGATGGAAGAGGTTGCTGTGTGAACATAAGTGAGATGTTAAGTGCGGCTTCCAACAACATAATTTGTAGGTGTATTATTGGACAGAAGTTTGAAACACAAGAGAGTAGTAGGTTTGGGGATTTGGCCCGGAGGGAGGTGATTCATCTTGGGGATTTAAGTTTTGGAGATGTGTTCCCTTTGTTGGGTTGGGTTGATCATGTGACAGGGAAAGTGAGGGAGTTTAGGAAGAATTTTGTAGAATTGGATCGTTTCTTTGATGAAGTGATCGCTGAGCACAAGGGAGCGAAGAAGGAGGGCAATGATGAGAAGAAAGATTTTGTGGATATCCTTCTCCAAGCTCAAGAAAGTAAAGATCAACTTGACTTTGAGCTCGATCAGGATAACTTCAAAGCCATCCTAACGGACATGTTCTTAGGAGGAAATGACACAACCTCAACAACAATGGAGTGGGTAATGTCAGAACTTATGAGTAATCCAAGATCAATGAAAAAAGTACAAGAAGAGATAAGAAGAGTGAGGGACCCGCAAGTATGGGAAAAGCCTGAAGAGTTCATGCCAGAGAGATTTGAAGAGAGAGATATTGATTTCAAAGGACAAGACTTTGAATATATTCCATTTGGTTCAGGAAGAAGAATTTGTCCAGGAATGGCATTTGGGTTAGCTTCCATTGATTATGAACTGGCTAATCTTCTTTATTGGTTTGACTGGAAGTTGCATGAATCTTCTGCGAGTGAGTTATTAGATATGGGTGAGACGTTTGGGCTGGTCGTCAAAAAGACAATGCCACTTTATCTTGAGCCAAAACCCTACTTTGTTCCTATGTAG	990	0.404	MAFSSYGESWRQKRKLCVLELLSLKRVRSFQFIRDDEIQDLISNIRKCYSRSNNNDGRGCCVNISEMLSAASNNIICRCIIGQKFETQESSRFGDLARREVIHLGDLSFGDVFPLLGWVDHVTGKVREFRKNFVELDRFFDEVIAEHKGAKKEGNDEKKDFVDILLQAQESKDQLDFELDQDNFKAILTDMFLGGNDTTSTTMEWVMSELMSNPRSMKKVQEEIRRVRDPQVWEKPEEFMPERFEERDIDFKGQDFEYIPFGSGRRICPGMAFGLASIDYELANLLYWFDWKLHESSASELLDMGETFGLVVKKTMPLYLEPKPYFVPM	329

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi09g0332	329	PANTHER	CYTOCHROME P450 71B11-RELATED	1	226	-	-
	Mibi09g0332	329	PRINTS	P450 superfamily signature	259	268	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mibi09g0332	329	PRINTS	P450 superfamily signature	268	279	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mibi09g0332	329	PRINTS	P450 superfamily signature	194	211	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mibi09g0332	329	Gene3D	Cytochrome P450	1	227	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mibi09g0332	329	Gene3D	Cytochrome P450	228	318	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mibi09g0332	329	Pfam	Cytochrome P450	228	311	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mibi09g0332	329	Pfam	Cytochrome P450	3	227	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mibi09g0332	329	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	261	270	IPR017972	GO:0005506\|GO:0016705
	Mibi09g0332	329	SUPERFAMILY	Cytochrome P450	2	324	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi09g0332	Mibi-ChrMibi09	4188830	4190774	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi09g0332	1	326	Cytochrome P450	AT3G26320	32.658	1.96e-62	204

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