Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0314 ATGTCGCTGGATTCGTCTGAACAAGATGATGCTGATTCTGAGTTCGTGGAGATTGACCCCACCGGTCGATATGGTCGGTACAAGGAGGTTTTGGGTCAGGGGGCTTTCAAGAAGGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCAGATCTATTGGCTAACAATGAAGATTTGGAGCGCCTATATTCGGAAGTGCATTTGCTGAAGACTTTGAAGCATAAAAATATAATCAAACTTTACAATTCATGGATTGATACAAAGAATGAGAACATCAACTTCATCACTGAAATTTTCACTTCTGGAACATTACGCCAATATCGGCAGAAACATAAGCATGTTGACTTGAGAGCTTTGAAGAAATGGTCTAGACAGATTTTGGAGGGTCTTTCTTATCTCCACAGCCGTGATCCACCGGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGCGAGGTTAAAATAGGTGATTTGGGATTGGCTGCCATACTTCAGCAAGCCAATTCAGCTCACAGTGTTATAGGCACCCCAGAGTTTATGGCTCCTGAGCTTTATGAAGAAGAGTACAATGAACTTATTGACATCTATGCTTTTGGTATGTGCTTGCTTGAGTTGGTGACTGTTGAGTATCCATATGTTGAATGCGCTAATGCTGCTCAAATATTCAAGAAAGTGACATCTGGAATCAAGCCAGCATCACTGGCAAAAGTGAAAGATCCTGAAGTTAAAGCATTTATAGAAAAGTGTATTGCAGATGTTTCTGAGCGGTTGCCTGCAAAGGAACTCTTAAGAGATCCCTTTCTTCTCCCAGATGATGAAAGTGACAGTGTAGGTGGTTCTTTAAGGTCCAGAGTCCTTGATTTTGAATATAGCGACAATCATGCTATTGATAATCATCCCAAAGATACTGAGACCGGTTGGGAATTCAAAGTAGAAGGTCAAAGGGGAGATGTCAATACTATATTTCTGAATCTGAGAATAGAAGACTCCTCAGGTAAATTTCGCATAATCCACTTCCCTTTTGATGTTGAAGCAGACACTGCAATTTCTGTTGCTAGTGAAATGGTTCAGGAGTTGGAACTCACGAATCAAGATGCTGCAACTATTGCTGAGATGATTGACTCAGAAATTCGATATCTCATTCCAGACTGGAACCCAAATGAAACTCCTACTGCTGATAGCATTGACCAAAAATTTGCAATTTCAGGTGGTCATGCCTCAAAAACTAGGGATGTGGCTTCTCCACAATGGTGTAGTTTTACAACTTCTGCCAGTAGTCTTTCACTGGAACGATTACCTTCAGGTCGTAGTTACTGGTCTGACCCACCCAAGATAGGTGGAAACTCTCCATTGACGCTTGGTGCTTCAAAATTGTCTTGTCAAGTGGATCTGAATTTAGCAGGAACTTCAACCGCATACAATTCTACTTCAGCTGAGTCGCAAGATGACAACTGCAGTCGTGATGGTGATAATAGTGTTGAGAAGAAATCTAGTGGGGCTGTTGATTCCCATTCCAGTGAGAGAGGTATTACATCTGGGGATTTACAAGAAACCAATGGAGAGCCTCCTTTGGTGGAAAGACCTGTATTGAAAGGCAATGAGTCAGAAGATGTCATCGTAATTGCTGCAAAACTCAAGCAATTATTGGCAAAACATCAAGAGGAAGAAGATGAACTAAAGAGGAAGCATGAATTTGCGGTCTCAGATTTTCTCAAGGGACTTCCTCAAGAAATTCAACATAAGGTCTTAAATGTATGCAGCCCGGAGGCGTCTGACAGTGGAAATGCACTGTAA 1839 0.4127 MSLDSSEQDDADSEFVEIDPTGRYGRYKEVLGQGAFKKVYRAFDELEGIEVAWNQVKVADLLANNEDLERLYSEVHLLKTLKHKNIIKLYNSWIDTKNENINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILEGLSYLHSRDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELIDIYAFGMCLLELVTVEYPYVECANAAQIFKKVTSGIKPASLAKVKDPEVKAFIEKCIADVSERLPAKELLRDPFLLPDDESDSVGGSLRSRVLDFEYSDNHAIDNHPKDTETGWEFKVEGQRGDVNTIFLNLRIEDSSGKFRIIHFPFDVEADTAISVASEMVQELELTNQDAATIAEMIDSEIRYLIPDWNPNETPTADSIDQKFAISGGHASKTRDVASPQWCSFTTSASSLSLERLPSGRSYWSDPPKIGGNSPLTLGASKLSCQVDLNLAGTSTAYNSTSAESQDDNCSRDGDNSVEKKSSGAVDSHSSERGITSGDLQETNGEPPLVERPVLKGNESEDVIVIAAKLKQLLAKHQEEEDELKRKHEFAVSDFLKGLPQEIQHKVLNVCSPEASDSGNAL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0314 612 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0314 612 Gene3D - 334 413 - -
Mibi09g0314 612 FunFam probable serine/threonine-protein kinase WNK9 108 288 - -
Mibi09g0314 612 Gene3D Phosphorylase Kinase; domain 1 8 106 - -
Mibi09g0314 612 Coils Coil 557 584 - -
Mibi09g0314 612 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 555 - -
Mibi09g0314 612 MobiDBLite consensus disorder prediction 518 533 - -
Mibi09g0314 612 MobiDBLite consensus disorder prediction 498 517 - -
Mibi09g0314 612 MobiDBLite consensus disorder prediction 489 545 - -
Mibi09g0314 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Mibi09g0314 612 Gene3D Transferase(Phosphotransferase) domain 1 108 288 - -
Mibi09g0314 612 FunFam Probable serine/threonine-protein kinase WNK1 9 106 - -
Mibi09g0314 612 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0314 612 SUPERFAMILY Protein kinase-like (PK-like) 27 284 IPR011009 -
Mibi09g0314 612 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0314 612 CDD STKc_WNK 23 283 - -
Mibi09g0314 612 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 338 392 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0314 Mibi-ChrMibi09 3833326 3836626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0314 13 407 MAP Kinase Kinase Kinase AT3G22420 54.484 2.72e-166 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mibi09g0314 Pkinase 4.1e-52 CL0016