Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0304 ATGGCGACGGATTCCGCCGCCATGGGAACAACAATCTTCTCCCTTCTCTTCATCATCATCACCATCATCCCTCCCATCTCAGCCGTCGACTTCCTCTTCAACTCCTTCAACGGCAACGGCACCTTCATCAATGGCACCACCCTCACCCTCATCAACGACGCACGCATCGACCACTCCGTCATCCTCATGACCAACAACTCCAACCAATACTCCTTCGGAAGATCCTTCTACCCATCCACCATCCCCATCACAAGAAATTCCACTTCCTCCTTCTCCACCTCCTTCATCTTCTCCATCCTCCCCCAGATCTCCACCAGCCCTGGCTTCGGCCTCGCCTTCGTCCTCACCAATACCATGTCTCCACCTGGCGCTCTCGCCAGCCAATACTTCGGCCTCTTCACTAACGCCACCCACCCCTCCGTCAAACCCCTCCTCGCCGTCGAATTCGACACCGGACAAAACCCTGAATTCAACGATCCAGATGATAACCACATCGGCATCGATCTCAACAACATTGAATCTGTTGTCACCAAATCCGCTGGCTACTATAATTCTACCGGTGGTTTTGTTCCCATTCGGATGCGGGATGGCCGTAATGTTAGGGCTTGGATCGATTTTGATGGCTCCAATTTCGAGATCAATGTTACCGTGGCTCCGATTGGTGTTGCGAGGCCGTTGATTCCGACGCTCTCGTATAGAGATCCGGTGATTGCTAATTATGTCTCTGCGGATATGTATGTTGGATTCTCTGCTTCCAAGACGAATTGGGTTGAGTCACAGAGGCTTCTAGCTTGGAGCTTCAGTGATACCGGACCCGCCAGGGAAATCGACACTGCGAATTTGCCTGTTTTTGAGCCTGAATCGTCTTCCTCGAAGCTTTCAGGTGGAGCGATTTCCGGGATTGTCATAGGATGCTTTGCTTTTTTGTTGATATGTGGTTCTGGGATTTTTTACCTTTGGTGGCGGAAAAAGAAATTGAAGGAGCAAGAGGATGAGATCGAAGATTGGGAGCTAGAATACTGGCCTCACAGATTCTCATACGATGAACTTTCTATAGCTACTAATGAATTTCACAAGGAGAATCTTCTAGGTTCGGGAGGGTTCGGGAGAGTATACAAAGGAACACTATCAAACAACAACACAGAAATCGCAGTGAAGTGCGTGAGCCACGACTCCAAGCAAGGGCTAAGAGAATTCATGGCGGAGATCTCCAGCATGGGGAGGTTACAACACAAGAATCTGGTACAATTAAGAGGATGGTGCAGGAAATTAAACGAGCTCATGTTAGTCTACGATTACATGCCCAACGGGAGCCTCAACAGATGGATCTTCGACAAGCCAACAACACTCCTAGGTTGGAAACAACGTAGGAGAATCCTCGCTGATGTCGCCGAAGGCCTAAACTATCTCCACCATGGGTGGGACCAGGTGGTGATACACAGGGACATAAAATCGAGCAATATATTGTTGGATTCAGAGATGAGGGGGAGGTTGGGGGATTTTGGGTTGGCGAAGCTATATGAGCAAGGTGAGATTCCGAACACGACGAGGGTGGTGGGGACGTTGGGGTATTTGGCGCCGGAGCTGGCGGCGGTGGCGGCGCCGACGGTGGCGAGCGATGTGTACAGTTATGGGGTGGTGGTGTTGGAGGTGGCTTGTGGGAGGAGGCCGATAGAGACGGCGGCGCCGGAGGAGGAGGTGGTGTTGATTGATTGGGTGAGGGATTTGTATGCGAAGGGGAGTGTGGTGGAGGCGGCGGATGAGAGGATAGAGGGAGAGTATGATTTGGGAGATATGGAGATGATTTTGAAGCTTGGATTGGCTTGTTGTCATCCTGATCCCACTAGGAGGCCCAACATGAAGGAGGTGGTTGTGCTTTTGATCGGGCAGGAGTTGTCCGCCGCCGCGCCGGAGAAATCGCTGTCGGAGCTGGCTCGTGGTGAGACCGGTGGTCCGGTGAGTGGCGACTTGGAGTCCAAGTAG 1983 0.5184 MATDSAAMGTTIFSLLFIIITIIPPISAVDFLFNSFNGNGTFINGTTLTLINDARIDHSVILMTNNSNQYSFGRSFYPSTIPITRNSTSSFSTSFIFSILPQISTSPGFGLAFVLTNTMSPPGALASQYFGLFTNATHPSVKPLLAVEFDTGQNPEFNDPDDNHIGIDLNNIESVVTKSAGYYNSTGGFVPIRMRDGRNVRAWIDFDGSNFEINVTVAPIGVARPLIPTLSYRDPVIANYVSADMYVGFSASKTNWVESQRLLAWSFSDTGPAREIDTANLPVFEPESSSSKLSGGAISGIVIGCFAFLLICGSGIFYLWWRKKKLKEQEDEIEDWELEYWPHRFSYDELSIATNEFHKENLLGSGGFGRVYKGTLSNNNTEIAVKCVSHDSKQGLREFMAEISSMGRLQHKNLVQLRGWCRKLNELMLVYDYMPNGSLNRWIFDKPTTLLGWKQRRRILADVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYEQGEIPNTTRVVGTLGYLAPELAAVAAPTVASDVYSYGVVVLEVACGRRPIETAAPEEEVVLIDWVRDLYAKGSVVEAADERIEGEYDLGDMEMILKLGLACCHPDPTRRPNMKEVVVLLIGQELSAAAPEKSLSELARGETGGPVSGDLESK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0304 660 Gene3D - 27 282 - -
Mibi09g0304 660 Pfam Protein kinase domain 357 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0304 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Mibi09g0304 660 PANTHER - 54 629 - -
Mibi09g0304 660 SMART serkin_6 357 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0304 660 CDD lectin_legume_LecRK_Arcelin_ConA 29 271 IPR001220 GO:0030246
Mibi09g0304 660 ProSiteProfiles Protein kinase domain profile. 357 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0304 660 MobiDBLite consensus disorder prediction 637 660 - -
Mibi09g0304 660 FunFam L-type lectin-domain containing receptor kinase S.4 27 275 - -
Mibi09g0304 660 FunFam L-type lectin-domain containing receptor kinase S.1 342 433 - -
Mibi09g0304 660 Gene3D Transferase(Phosphotransferase) domain 1 434 640 - -
Mibi09g0304 660 CDD STKc_IRAK 363 624 - -
Mibi09g0304 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 284 IPR013320 -
Mibi09g0304 660 FunFam L-type lectin-domain containing receptor kinase S.4 434 640 - -
Mibi09g0304 660 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Mibi09g0304 660 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Mibi09g0304 660 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Mibi09g0304 660 Pfam Legume lectin domain 29 281 IPR001220 GO:0030246
Mibi09g0304 660 SUPERFAMILY Protein kinase-like (PK-like) 333 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0304 Mibi-ChrMibi09 3710966 3712948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0304 27 629 Receptor kinase-like Gene Family AT1G15530 69.885 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi09g0304 Pkinase 3.5e-52 CL0016