Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0297 ATGGGAAGGCATTCGTGTTGTGTGAAGCAAAAATTGAGGAAGGGACTATGGTCCCCTGAAGAAGATGAGAAGCTCTTCAATTATATCACCACTTTTGGAGTTGGCTGCTGGAGTTCTGTTCCCAAACTTGCTGGGTTGCAAAGATGTGGAAAAAGTTGCAGATTGAGATGGATTAATTATCTGAGGCCTGATTTGAAGAGAGGCATGTTTTCCCAGCAAGAAGAAGATCTCATAATCAGCCTTCATGAAGTTCTTGGCAATAGGTGGGCTCAGATTGCAGCACAGTTACCAGGAAGGACAGATAATGAGATAAAGAACTTCTGGAATTCAAGCCTGAAGAAGAAGCTACTGAAGCAAGGGATTGACCCAGCCACACACAAGCCTCTAATAATGAAGGATGACAAGAAAACTAATAATCTCATAGATCATTCATCAGAGAACACAATTTTATTACCATCTTCTATGCAGATTCCATTCTCAGTTTCATCATCATCACAAGTTTCATCATCAGCTCTAGCAGCAGGAAGTGATTCCAACCAATTCGACAATAACAACAACAACAATAATGGTTACTATGACCCATTGGCCTTATTCGAGTCTTTCCAAATGGGTGGTTTAACCCATTTATCTTCTGGGTTCGGATTCAACATGCCAGGACTGATCACAAATTCAAGTTCAAGTAATAGCTTGAGCAGCTATGTTCAAGGAGGAGAAGGGTGTAATAATCAGATTATAGGTAATAATAACAGCTTAATGATGGATCCATTGTTGTATCATCAGTTTCAAGTGAATAATGGGACTATAAAGAATGAAGAAGAAGATTATTATGAGTTGATGAAGAATACGACGTCGTCTTGGGAAGAAGATCTGAATAATCAAACCTCCATAGATTTCACCGCCACCTATCCGTTAACGTCACTGTCACAAGATTTATCGCCTCCGAATTTCGATGCTTTCAACCATATGTGA 969 0.3973 MGRHSCCVKQKLRKGLWSPEEDEKLFNYITTFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLLKQGIDPATHKPLIMKDDKKTNNLIDHSSENTILLPSSMQIPFSVSSSSQVSSSALAAGSDSNQFDNNNNNNNGYYDPLALFESFQMGGLTHLSSGFGFNMPGLITNSSSSNSLSSYVQGGEGCNNQIIGNNNSLMMDPLLYHQFQVNNGTIKNEEEDYYELMKNTTSSWEEDLNNQTSIDFTATYPLTSLSQDLSPPNFDAFNHM 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0297 322 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi09g0297 322 FunFam Transcription factor MYB86 69 137 - -
Mibi09g0297 322 CDD SANT 70 112 IPR001005 -
Mibi09g0297 322 CDD SANT 17 61 IPR001005 -
Mibi09g0297 322 SMART sant 66 114 IPR001005 -
Mibi09g0297 322 SMART sant 13 63 IPR001005 -
Mibi09g0297 322 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mibi09g0297 322 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi09g0297 322 Gene3D - 68 144 - -
Mibi09g0297 322 FunFam Myb transcription factor 11 67 - -
Mibi09g0297 322 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi09g0297 322 Gene3D - 11 67 - -
Mibi09g0297 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi09g0297 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi09g0297 322 PANTHER MYB DOMAIN PROTEIN 55 1 285 - -
Mibi09g0297 322 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0297 Mibi-ChrMibi09 3648597 3649938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0297 1 140 MYB Transcription Factor Family AT1G57560 77.143 1.81e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g0297 Myb_DNA-binding 2.9e-13 CL0123