Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0293 ATGTCATCCTCCTCCTCATCATCAAGCTCATACAATTCACCATGTGCAGCCTGCAAATTCTTGAGGAGAAAATGCTTGCCAGGATGCATATTCGCTCCATATTTCCCACCAGAAGAGCCTCAGAAATTTGCAAACGTCCATAAAATATTTGGGGCAAGCAATGTGACTAAGCTTCTGAATGAACTCCTTCCTCATCAACGTGAAGACGCCGTCAACTCCCTTGCCTACGAAGCCGAGGCTCGTGTCCGAGACCCTGTCTACGGCTGCGTCGGCGCCATCACTTTCCTTCAAAGACAAGTTCAAAGGCTTCAAAAAGAGCTCGACGCCGCCAACGCCGATCTCCTCCGGTACGCCTGCACCGACATAGAGCCATCGCCGCCGGCTGGATTCGGCTCTTCGGTTCAGCCGTTTGCCGGTTCGGACGGCGTTTATAGGCAGTCTTCTAGTGGATATTCTTTTGATTGGGCTGATTCTTCTTCAGAGGACATCAATAATGGAGGAGGAGGAGGAGGTACTTTGTGA 522 0.5077 MSSSSSSSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAITFLQRQVQRLQKELDAANADLLRYACTDIEPSPPAGFGSSVQPFAGSDGVYRQSSSGYSFDWADSSSEDINNGGGGGGTL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0293 173 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Mibi09g0293 173 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Mibi09g0293 173 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 128 - -
Mibi09g0293 173 Coils Coil 93 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0293 Mibi-ChrMibi09 3575867 3576388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0293 5 120 AS2 family AT5G63090 89.655 9.28e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi09g0293 LOB 5.4e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0293 09 3575867 3576388 Mibi13g0568 13 7453006 7453653 CCT
Mibi09g0293 09 3575867 3576388 Mibi13g0568 13 7453006 7453653 ECH
Mibi09g0293 09 3575867 3576388 Mibi09g0293 09 3575867 3576388 ECH