Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0284 ATGCCTGAAAATCCATGGACGACCCTCTTCTTATTCCTAGTGACTTCACTTTTATTTCATTCCCAATATTCTTTTATTGCTTCCGCGGTTAACCCACAAGGGCAAGCTCTTCTTTCATGGAAGACAACATCCCTAAACGGGTCCTTGGAGGTGTTGGGTAATTGGGACCCAATTGATGAAACTCCTTGTGGCTGGTTTGGAGTAAGCTGCAACTTCAAGAACGAGGTTGTGCAATTAGATCTGAGGTATGTTGATTTGCTTGGAAGACTTCCTTCTAATCTCACTTCATTGAGTTCCTTGACCAAGCTTATCCTTACTGGAACCAACCTTACTGGTTCTATCCCAAAAGAGATAGGCTTCTTTCTTAGAAATCTCACCTACTTGGATTTAAGTGACAATGCCTTGACTGGTGAGATCCCAAGTGAAATTTGCTTTTTGCCTGAGCTTCAAGAACTTCATCTTAACTCAAACCAGCTTGAAGGGACGATTCCAATTGCAATAGGGAATCTCACAAAGTTGGAGTGGCTGGTCTTATATGATAATCAGCTTAGTGGTGAAGTTCCCAGAACGATCGGGAATCTGAAGACTCTGCAAGTGGTTCGAGCTGGTGGAAACAAGAACCTTGAAGGTGCTTTGCCTCAAGAAATAGGAAACTGTACCAAATTGGTCATGTTGGGTTTAGCTGAAACAAGTATCTCAGGGTTTCTTCCTCCAACTCTTGGCCTCCTCAAGAAGCTGAACACTATTGCAATTTACACTTCCCTCCTCTCTGGCCAGATTCCTCCTGAGCTCGGTGACTGCACTGAACTTGAGAACATATATTTGTACGAGAATTCCCTAACTGGATCAGTACCTAGCAGATTGGGAAATCTTAGGAATCTCAAGAATCTTCTTTTATGGCAGAACAATTTAGTTGGCACCATCCCACCAGAGATTGGAAATTGCTACAAGTTATCTGTCATTGACATCTCAATGAACTCACTTACAGGAAGCATTCCCAAGAGTTTTGGAAATCTGACTGCTTTGGAAGAACTACAACTCAGTGAAAACCAGATTTCAGGGGAGATTCCTACAGAGCTAGGCAACTGCCAGCAACTCACTCACATCGAGCTGGACAACAATCAATTCACAGGGACGATACCTTCTGAATTTGGAAACCTCAGTAATCTGACATTGTTGTTCCTGTGGCATAACAAGCTAGAAGGAAACATACCATCTTCACTCTCCAATTGCCAAGACCTCGAGGCTGTGGATCTGTCACAAAATGCACTCACAGGTCCCATCCCCAAGGGGATATTCGAGCTCAAGAATCTCAACAAGCTTCTGCTACTTTCTAACAATCTCTCCGGGGATATTCCATCTGAAATTGGGAATTGTTCGTCTTTGATTCGATTCCGAGCTAGCAAAAATAAGATCACAGGGAGCATACCCCCACAGATAGGGAATCTGATGAACTTAAACTTTTTGGATCTAGGTTTAAATCGGATTTCAGGATTTATTCCACAAGAGATATCAGGCTGCAAGAATCTCACATTCTTAGACCTACATTCCAACATGATCGCCGGTAGCTTACCGGAGAGTTTCAGTGAGCTTGTCTCACTTCAATTCATCGATTTCTCAGATAACATAATCGAAGGTACACTGAGCCCGAGACTCGGATCACTAGGCTCACTCACAAAACTGATTCTCGGAAAGAATCACATCTCTGGTTCAATCCCGAGTCAACTCGGTTCCTGTTCGAAGCTTCAGTTACTGGATCTTAGCAGCAACAATTTCTCCGGCGAAATCCCCGGTAGCCTTGGCAACATCCCTGCGCTTGAAATTTCACTGAATCTGAGCTTAAACAAACTCTCCGGCGAGATTCCTCAAGAGTTTTCAGGCTTAGTTAAGCTAGGGATCTTAGACATTTCACACAACGAACTCACCGGGAACCTCCATTACCTCTCAGATCTCCAAAACCTCGTCGTCCTCAACGTCTCATACAACAAATTCTCCGGCCACATCCCTAACACGCCTTTCTTCTCGAAGCTTCCTCTGAACATGCTCGCCGGAAACCCTTCCCTCTGCATCTCCGTCAACCGATGCGACTACGAAGACGATTCCGAAAATCGTTCTCGCAAACGTGCGAAGACGGCGCGTATAGCCATGGTGGTCCTACTTTGCACAGCATGTGGTCTCCTCTTGGCGGCGCTTTACGTCGTCGTTTCGGCAAAACGACGACGTAGGGACCACCGTAACGATCTCGATGGGAGGGAAAGTGACATGGAGATGTTGGGCCCACCATGGGAGGTGACAGTGTACCAGAAGCTCGACCTGTCAATTTCCGACGTGGTCAAAAGTCTCACCGCCGGGAATGTCATTGGAAGAGGAAGATCCGGCGTCGTTTACAGAGTGAACTCGCCGACGGCGGGGATGGATATGGCGGTGAAGAAGCTCCGGTCGTCGGAGAAGTTCTCTGCGGCGGCGTTCGCGGCGGAGATAACGACGCTGGCTAGAATACGGCACCGGAATATTGTGAGGCTTTTAGGGTTTGGGACGAACAAGAAGACGAAGTTACTATTTTATGATTTTTTACCGAATGGTAATTTGGATTCGCTTTTACACGAGGGGTGCGTAGGATTAATTGAGTGGGATACACGGTTTAAGATAGCGTTGGGTGTAGCAGAAGGGTTGGCTTATTTGCATCATGACTGTGTGCCTGCTATCTTGCACCGGGATGTGAAAGCGCATAATATATTGTTGGGGGACAGGTATGAGGCTTGTCTTGCGGATTTTGGTTTTGCTAGGTTGGTTGAAGATGATCCTGCTTCTTTCTCTGTGAATCCTCAGTTTGCTGGTTCTTATGGCTACATTGCGCCGGAGTATGGGTGCATGCTGAAGATAACAGAGAAGAGCGATGTTTATAGCTTTGGAGTTGTATTGTTAGAGATAATAACAGGCAAACGACCTGTGGACCCATCGTTTGGTGAGGGTCTACATGTGATAGATTGGGTGAGAGATCATTTGAAAAGGAAGAAGGACCCTGTTGAAATTGTGGATCCAAAACTTCAAGGCCATACAGATACACACATACAAGAGATGCTTCAAGCATTGGGCATTTCACTCCTTTGTACTAGTACTCGTCCCGATGATCGTCCCACCATGAAAGATGTCGCCGCCTTGCTCCGGGAGATCCGGCATGATCCTCCGGTGGGCCATGAGGCCCACAAGCCCAAGCCCACCACCAACTCTTCATCCTCCTCCTCTGTCACTCCGGCCCAATTGTTGCTTCTTGATCATAATCCTTCATCTATTTCTTCTTCAATTGCTTATTCGACTTCTAATTTACAAGGAAGGAGTGTGTGA 3345 0.4604 MPENPWTTLFLFLVTSLLFHSQYSFIASAVNPQGQALLSWKTTSLNGSLEVLGNWDPIDETPCGWFGVSCNFKNEVVQLDLRYVDLLGRLPSNLTSLSSLTKLILTGTNLTGSIPKEIGFFLRNLTYLDLSDNALTGEIPSEICFLPELQELHLNSNQLEGTIPIAIGNLTKLEWLVLYDNQLSGEVPRTIGNLKTLQVVRAGGNKNLEGALPQEIGNCTKLVMLGLAETSISGFLPPTLGLLKKLNTIAIYTSLLSGQIPPELGDCTELENIYLYENSLTGSVPSRLGNLRNLKNLLLWQNNLVGTIPPEIGNCYKLSVIDISMNSLTGSIPKSFGNLTALEELQLSENQISGEIPTELGNCQQLTHIELDNNQFTGTIPSEFGNLSNLTLLFLWHNKLEGNIPSSLSNCQDLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLSGDIPSEIGNCSSLIRFRASKNKITGSIPPQIGNLMNLNFLDLGLNRISGFIPQEISGCKNLTFLDLHSNMIAGSLPESFSELVSLQFIDFSDNIIEGTLSPRLGSLGSLTKLILGKNHISGSIPSQLGSCSKLQLLDLSSNNFSGEIPGSLGNIPALEISLNLSLNKLSGEIPQEFSGLVKLGILDISHNELTGNLHYLSDLQNLVVLNVSYNKFSGHIPNTPFFSKLPLNMLAGNPSLCISVNRCDYEDDSENRSRKRAKTARIAMVVLLCTACGLLLAALYVVVSAKRRRRDHRNDLDGRESDMEMLGPPWEVTVYQKLDLSISDVVKSLTAGNVIGRGRSGVVYRVNSPTAGMDMAVKKLRSSEKFSAAAFAAEITTLARIRHRNIVRLLGFGTNKKTKLLFYDFLPNGNLDSLLHEGCVGLIEWDTRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYEACLADFGFARLVEDDPASFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSFGVVLLEIITGKRPVDPSFGEGLHVIDWVRDHLKRKKDPVEIVDPKLQGHTDTHIQEMLQALGISLLCTSTRPDDRPTMKDVAALLREIRHDPPVGHEAHKPKPTTNSSSSSSVTPAQLLLLDHNPSSISSSIAYSTSNLQGRSV 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0284 1114 Pfam Leucine Rich Repeat 581 602 IPR001611 GO:0005515
Mibi09g0284 1114 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 386 1050 - -
Mibi09g0284 1114 ProSiteProfiles Protein kinase domain profile. 781 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0284 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 694 - -
Mibi09g0284 1114 SUPERFAMILY Protein kinase-like (PK-like) 771 1057 IPR011009 -
Mibi09g0284 1114 SUPERFAMILY L domain-like 441 689 - -
Mibi09g0284 1114 SUPERFAMILY L domain-like 46 377 - -
Mibi09g0284 1114 Gene3D Ribonuclease Inhibitor 202 265 IPR032675 -
Mibi09g0284 1114 Gene3D Phosphorylase Kinase; domain 1 763 857 - -
Mibi09g0284 1114 Pfam Protein kinase domain 784 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0284 1114 Gene3D Ribonuclease Inhibitor 29 201 IPR032675 -
Mibi09g0284 1114 SMART serkin_6 781 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g0284 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672|GO:0006468
Mibi09g0284 1114 MobiDBLite consensus disorder prediction 1060 1084 - -
Mibi09g0284 1114 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Mibi09g0284 1114 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Mibi09g0284 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 30 205 - -
Mibi09g0284 1114 Gene3D Ribonuclease Inhibitor 268 435 IPR032675 -
Mibi09g0284 1114 Gene3D Ribonuclease Inhibitor 436 697 IPR032675 -
Mibi09g0284 1114 FunFam Leucine-rich repeat receptor protein kinase EMS1 525 609 - -
Mibi09g0284 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 430 524 - -
Mibi09g0284 1114 SUPERFAMILY L domain-like 288 521 - -
Mibi09g0284 1114 SMART LRR_sd22_2 507 533 - -
Mibi09g0284 1114 SMART LRR_sd22_2 170 196 - -
Mibi09g0284 1114 SMART LRR_sd22_2 387 413 - -
Mibi09g0284 1114 SMART LRR_sd22_2 122 148 - -
Mibi09g0284 1114 SMART LRR_sd22_2 267 293 - -
Mibi09g0284 1114 SMART LRR_sd22_2 628 653 - -
Mibi09g0284 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 858 1072 - -
Mibi09g0284 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 206 429 - -
Mibi09g0284 1114 ProSiteProfiles Leucine-rich repeat profile. 124 146 IPR001611 GO:0005515
Mibi09g0284 1114 SMART LRR_typ_2 555 579 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 387 411 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 146 169 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 483 507 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 339 363 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 508 530 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 291 315 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 122 144 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 435 459 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 651 684 IPR003591 -
Mibi09g0284 1114 SMART LRR_typ_2 170 194 IPR003591 -
Mibi09g0284 1114 ProSitePatterns Protein kinases ATP-binding region signature. 787 811 IPR017441 GO:0005524
Mibi09g0284 1114 Gene3D Transferase(Phosphotransferase) domain 1 858 1073 - -
Mibi09g0284 1114 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0284 Mibi-ChrMibi09 3398521 3402977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0284 29 1060 Receptor kinase-like Gene Family AT5G56040 55.278 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi09g0284 Pkinase 2.1e-41 CL0016