Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0275 ATGCGCCTTGCTTGTTTTTACTGTTCTTGCTCTCCATCACTCTTCTCTCTCTCTCTCTCTCTTTCTCGCAAACCCTCACCCTTTCTCTTTGCTATGTTTATACATGCACCATGTTATTCTTTTCCCCGTTATTACATTTGTGTGTGTATCGATACTTCATTTAGGCAGCGCCTGGTGGTAATTATTGTGTCTCTGATAGATGAAGGTACTGGATCATCCGAGGATGACATGAGTAGGGAAGAGAAAGAAGAAAACGGGTCCAAGAGAATCACTGAGGATCGAGAGTTGAAGGACAAACTTCTCCGTAGATATAGCGGATATATTATTGGCCTAAAGCATGAATTTTCTAAAAAGAAGAAGAAAGAGAAGCTACCCAAAGATGCAATACAAATATTGCTTGCATGGTGGAATCTTCACTTCAAATGGCCATACCCTACGGAAGCGGATAAGGTTGCATTAGCTGAATGGACAGGGCTGGATCAAAAGCAGATAAACAATTGGTTTATTAACCAAAGGAAGCGCCATTGGAAGCCAACAGAGGAAATGCAAGCAGCAGTTTGGGATGGCCTCTATGGACCTTTTTCCAACGGTGATTGA 597 0.4221 MRLACFYCSCSPSLFSLSLSLSRKPSPFLFAMFIHAPCYSFPRYYICVCIDTSFRQRLVVIIVSLIDEGTGSSEDDMSREEKEENGSKRITEDRELKDKLLRRYSGYIIGLKHEFSKKKKKEKLPKDAIQILLAWWNLHFKWPYPTEADKVALAEWTGLDQKQINNWFINQRKRHWKPTEEMQAAVWDGLYGPFSNGD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0275 198 Gene3D - 112 186 - -
Mibi09g0275 198 Pfam ELK domain 95 116 IPR005539 GO:0003677
Mibi09g0275 198 SMART HOX_1 117 182 IPR001356 GO:0003677
Mibi09g0275 198 Pfam Homeobox KN domain 135 174 IPR008422 GO:0003677|GO:0006355
Mibi09g0275 198 SMART ELK_2 95 116 IPR005539 GO:0003677
Mibi09g0275 198 SUPERFAMILY Homeodomain-like 116 190 IPR009057 -
Mibi09g0275 198 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 80 184 - -
Mibi09g0275 198 CDD homeodomain 127 178 IPR001356 GO:0003677
Mibi09g0275 198 ProSiteProfiles 'Homeobox' domain profile. 115 178 IPR001356 GO:0003677
Mibi09g0275 198 ProSiteProfiles ELK domain profile. 95 115 IPR005539 GO:0003677
Mibi09g0275 198 MobiDBLite consensus disorder prediction 70 89 - -
Mibi09g0275 198 MobiDBLite consensus disorder prediction 72 89 - -
Mibi09g0275 198 ProSitePatterns 'Homeobox' domain signature. 153 176 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0275 Mibi-ChrMibi09 3319733 3322405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0275 67 194 Homeobox Transcription Factor Family AT1G23380 61.538 3.63e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mibi09g0275 Homeobox_KN 4e-16 CL0123