Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0258 ATGGATTTTTCTCCTTTTCACGACCACGTCTGCATGGAACCTTCCGATCATTGGCTTCAGGGGGCAGTTCAAGAGGACTCTGTGGGAGTGGTAATGGATTCATCATCATTATCTTCATCCCCACCACTGATGGAGAGGAGGGTAAGGCCAGCTCCTACAGACCAAGCTTTGAAGTGTCCGAGGTGTGAGTCAACGAACACAAAGTTCTGTTACTACAACAACTATAGTCTGTCTCAGCCAAGGTATTTCTGCAAAACTTGTAGAAGGTATTGGACCAAAGGTGGCACTTTGAGAAACATCCCAGTGGGTGGAGGTTGCAGAAAGAACAAGAAAGTCTCTTCCAATAAGAAACTCAATAACGACGTCGTCGTTCAACCCGACAATAATGATCTTCAGCTCATCTCAGCCGTTAGATCTAATTTCCCAGATCATCATCATCATGCTATGCATCATTTCCCCCACTCACTAATGGTGGAGAATTCCAAGTTTGGAGGGATGATAAATAATGTTATGGGAAATATTGGCGATAATACTGGGGATCATCAGATAAATTATGGGCACAATGGGTTATTATTGGCTCAGAATTTTCAGGGGTTTGGAGGGAATATGTGTTACTTTGATGGCTATAATAACAGTAATAATGGTGGGAATTATAGCACAATAATGGACTCTTTTTACCATGGAAATGATGAGGATCAAAATGGTGGCGCAATTATTCATGATGTGAAGCCAAATCCTAAGTTATTGTCTCTTGAATGGCAAGACCACCACCAAGGTTGTTCAGATAATGCTGCAGGTAAAGATCCTTTTGGGTATATCAACACTACCACCTTGGGATCATGGACCGGCATGGTCAATGGTTATGGACCATCCACAACAACCCTTTGA 888 0.4257 MDFSPFHDHVCMEPSDHWLQGAVQEDSVGVVMDSSSLSSSPPLMERRVRPAPTDQALKCPRCESTNTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSNKKLNNDVVVQPDNNDLQLISAVRSNFPDHHHHAMHHFPHSLMVENSKFGGMINNVMGNIGDNTGDHQINYGHNGLLLAQNFQGFGGNMCYFDGYNNSNNGGNYSTIMDSFYHGNDEDQNGGAIIHDVKPNPKLLSLEWQDHHQGCSDNAAGKDPFGYINTTTLGSWTGMVNGYGPSTTTL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0258 295 Pfam Dof domain, zinc finger 54 111 IPR003851 GO:0003677|GO:0006355
Mibi09g0258 295 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Mibi09g0258 295 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 46 194 IPR045174 GO:0003700|GO:0006355
Mibi09g0258 295 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0258 Mibi-ChrMibi09 3182720 3183798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0258 48 137 C2C2-Dof Transcription Factor Family AT5G60200 65.556 5.60e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi09g0258 zf-Dof 6.5e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0258 09 3182720 3183798 Mibi13g0602 13 7835788 7837385 CCT