Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0248 ATGAAGAAAACAAGTAATGAGTCTTCATCAAAAGTGGACCGCAAAACCATAGAAAGGAATCGCAGAATTCACATGAAAGCACTTTGCTTCAAGCTCGCTTCTCTCATTCCTCCCCACTACTTAAAACACACCAAGGACATGATATCTCAGCAAGACCAGCTGGATATAGCGGCGAGCTACATAAAGAATCTGAGGGAGAAACTGGAGAAGCTGAAGGAGAAGAAGGAGGAAGCCATGAAATTAAAGGAAACAACAAACAATAGTAGTTATAATAATAGTAATAACCCGGTGGGATTAATGGAGAACATGTTCATGGCTTCAGATCTTCCACTTCTTGAGCTCAGAGACTTGGGTTCCTCCATTGAAGTCATGCTCATAAGTGGGCTCAACAGAAACTTCATGTTATATGAAGTCATTAGTGTGCTTGAACAAGAAGGAGCTGAAGTTGTTAGTGCCAGCTTTTCCACTGTGGGTGATAAGATCTTCCACACTGTTCATGCCCAGGTGAAAATATCAAGAGTTGGTGTTGAAACCACAAGAGTGAATCAGAGGCTTCATGATCTGATTGCTCCACTCAAAAGCTGGGAGTATTTTTAA 597 0.4137 MKKTSNESSSKVDRKTIERNRRIHMKALCFKLASLIPPHYLKHTKDMISQQDQLDIAASYIKNLREKLEKLKEKKEEAMKLKETTNNSSYNNSNNPVGLMENMFMASDLPLLELRDLGSSIEVMLISGLNRNFMLYEVISVLEQEGAEVVSASFSTVGDKIFHTVHAQVKISRVGVETTRVNQRLHDLIAPLKSWEYF 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0248 198 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 188 IPR015660 -
Mibi09g0248 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 76 IPR036638 GO:0046983
Mibi09g0248 198 FunFam Transcription factor bHLH162 2 93 - -
Mibi09g0248 198 Gene3D - 1 92 IPR036638 GO:0046983
Mibi09g0248 198 Coils Coil 54 88 - -
Mibi09g0248 198 Pfam Helix-loop-helix DNA-binding domain 13 64 IPR011598 GO:0046983
Mibi09g0248 198 SMART finulus 15 70 IPR011598 GO:0046983
Mibi09g0248 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 64 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0248 Mibi-ChrMibi09 3038958 3039747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0248 9 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 35.519 1.46e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g0248 HLH 7.8e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0248 09 3038958 3039747 Mibi09g0248 09 3038958 3039747 ECH