Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0218 ATGGGTGGTGGCAATGGAAAACGCAGGTGGAGAATCTCCTTCCACCGTTCTTCCTCCTCCCCCTCAGATTCCAAGCTCGAATCAAAGAATCCCCCAAAGGAGTTTCTTTGTCCAATCTCTGGTATCTTCATGTCTGACCCAGTTGTTGTTGCTTCAGGCCACACATTCGAACGTGTCACCGTTCAAGTCTGCAGAGATTTGAACTTCTCCCCCAATCTCGAAGACGGGTCACGTCCAGATTTCTCCACAGTAATTCCCAATTTAGCCATAAGAAGCACAATCTCCAACTGGTGCAAGAACTCAGGCATCGAACTCCCTCAATCTCCTGAATACACCTCCGTCGAGAAAATCGTACGGTCATCAATGGCGTCTCGGAGGAAATCATCCCCAGATTTAAGGGTTTCAGAGAGGGAATTGCTTAAAGCAGTAGCAGACAACCCGCCGGTGATTTTCTCACACGCCGCCACCGAGTTAGGTCGACGAGTCAACCGATTCGACTCGTCGTCGTCTTCCTCAGAAGAATCGGTAATCATCGTTCCAAGTCCAGGCACGCCTCTGCATCTAGCAACCCGTCCAAACTGCTACTCTTCGTCCTCGTCTTCCTCCGTAACAATCGAATCGGAATTCCAAAACCCTAATTCCCCAATTTCGGAAGAAGAGGCGAAATTGATCACGAAGCTGAGAAGCAGCGAGATATTCGAGCAAGAAGAAGCGGTTATTTCGTTAAGAAGCATCACAAGGAACAGAGAGAGCACAAGAATTTCACTCTGCACTCCCAGATTACTCGAAGCCCTAAAACCCTTAATCGCTTCGAGATATTCAATCGTTCAAGTCAACGCAGTGGCTTCTCTGGTCAACCTGTCCCTCGAGAAATCCAATAAGGTGAAAATCGTTCGCCGTGGGTTCGTCCCGTACCTCATCGACGTTCTCAAAGGAGGATCCAATGAGTCGCAGGAACACGCCGTCGGCGCGATATTCAGCTTAGCATTAGACGACGATAACAAAATGGCGATCGGAGTTCTGGGCGCGTTTCAGCCGTTGATGCACGCGTTGAGGTCAGACTCGGAGCGAACTCGGAATGACTCGGCACTCGCGTTGTACCATTTGACGTTGGTGCAGAGCAACCGAGTCAAACTCGTTCGACTCGGGGCGATTCCGAGTCTACTGGGGATGTTGAAAGTAGGGAAATTGAGGAGCAGGGTGGTTTTGATTTTGTGTAATTTGGCTGTGTGTACGGAGGGGAAATCGGCGATGTTAGATGGGAATGCGGTGGAGTGTTTGGTGGGTTTGTTGAGGGGGAACGAGTTGGAGTCTGAGTCGACTCGGGAGAATTGTGTTGCTGCTTTGTATGCGCTTAGTCATGGGAGTTTGAGGTTTAGGGCTGTGGCTAGGGAGGCTAGGGTGATGGAGGTGTTGCAGGAGGTGGAGGAGAGGGGTACGGAGAGGGCTAGAGAGAAGGCTAAGAGGATATTGCAGATGTTGAGGGCGGGTGGAGAGGATGGGGAGGATGGAAATGGGTCGGGTTTCGATTTGGAAGCGGGCGGGTTGAACCGGAATCGGTTCAGAGGGAGGAATATCAACATTGCCAATTCAACTGCATTTTAA 1605 0.5047 MGGGNGKRRWRISFHRSSSSPSDSKLESKNPPKEFLCPISGIFMSDPVVVASGHTFERVTVQVCRDLNFSPNLEDGSRPDFSTVIPNLAIRSTISNWCKNSGIELPQSPEYTSVEKIVRSSMASRRKSSPDLRVSERELLKAVADNPPVIFSHAATELGRRVNRFDSSSSSSEESVIIVPSPGTPLHLATRPNCYSSSSSSSVTIESEFQNPNSPISEEEAKLITKLRSSEIFEQEEAVISLRSITRNRESTRISLCTPRLLEALKPLIASRYSIVQVNAVASLVNLSLEKSNKVKIVRRGFVPYLIDVLKGGSNESQEHAVGAIFSLALDDDNKMAIGVLGAFQPLMHALRSDSERTRNDSALALYHLTLVQSNRVKLVRLGAIPSLLGMLKVGKLRSRVVLILCNLAVCTEGKSAMLDGNAVECLVGLLRGNELESESTRENCVAALYALSHGSLRFRAVAREARVMEVLQEVEERGTERAREKAKRILQMLRAGGEDGEDGNGSGFDLEAGGLNRNRFRGRNINIANSTAF 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0218 534 MobiDBLite consensus disorder prediction 1 30 - -
Mibi09g0218 534 FunFam RING-type E3 ubiquitin transferase 11 105 - -
Mibi09g0218 534 Gene3D - 217 496 IPR011989 -
Mibi09g0218 534 SMART Ubox_2 34 97 IPR003613 GO:0004842|GO:0016567
Mibi09g0218 534 FunFam RING-type E3 ubiquitin transferase 218 494 - -
Mibi09g0218 534 CDD RING-Ubox 36 84 - -
Mibi09g0218 534 SUPERFAMILY RING/U-box 17 106 - -
Mibi09g0218 534 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 105 IPR013083 -
Mibi09g0218 534 PANTHER U BOX DOMAIN-CONTAINING 24 494 - -
Mibi09g0218 534 SMART arm_5 331 371 IPR000225 GO:0005515
Mibi09g0218 534 SMART arm_5 372 410 IPR000225 GO:0005515
Mibi09g0218 534 SMART arm_5 290 330 IPR000225 GO:0005515
Mibi09g0218 534 SMART arm_5 411 454 IPR000225 GO:0005515
Mibi09g0218 534 ProSiteProfiles U-box domain profile. 30 104 IPR003613 GO:0004842|GO:0016567
Mibi09g0218 534 SUPERFAMILY ARM repeat 223 494 IPR016024 -
Mibi09g0218 534 Pfam Armadillo/beta-catenin-like repeat 331 370 IPR000225 GO:0005515
Mibi09g0218 534 Pfam U-box domain 32 100 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0218 Mibi-ChrMibi09 2769317 2770921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0218 3 534 U-box Gene Family AT5G65200 56.584 0.0 567