Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0214 ATGAAGAAAAGTCGAAAGCGTGAAGAGAGCAACTTATCACCACAAGATCTTCCAATTATTCCCACTGAACTCTGTTGTGCTTTGCATTACACAGAGAGAGAGAGAGAGAGAGAGGGAAGCAAAGTAAAGATGACGATCACTGTTCCCGGTAGGCAGCTGTTCATAGATGGCGAGTGGAAAGAGCCGATCCGAAAGAAACGAATTCCTATCATCAATCCCTCCACTGAACTCAAAATTGGAGATATTCCAGCTGCTACTGCGGAGGATGTGGAGCTTGCAGTGGCTGCTGCTCGGAGAGCCCTGGTTAGGGATAAGGGTAAACATTGGGCAACAGCTTCTGGGTTTGTTCGTGCTCGGTATTTGCGAGCTATCGCTGCTAAGATAATGGAAAGGAAGTCTGAGCTAGGAAAACTTGAAGCACTTGATTGTGGAAAACCACTGGATGAAGCATTATGGGACATGGATGATGTTGCTGGTTGCTTTGAGTACTATGCTGACCTTGCTGAGGGATTGGATGCAAAGCAAAAGGCTCCCATATCCCTTCCCATGCAAACCTTCAAGAGTCATGTTCTTAGGGAGCCCATTGGAGTTGTTGCGTTGATTACTCCATGGAATTATCCTCTATTGATGGCTGTGTGGAAAGTTGCTCCTGCTTTGGCTGCTGGTTGTACTGCAATATTGAAGCCATCTGAATTGGCGTCTGTGACCTCTTTGGAGTTGGGTCAGATATGTAGAGATGTGGGCCTTCCTCCAGGTGTCTTAAATATTCTAACTGGATTAGGCCCTGAAGCTGGTGCTCCTATGGCATCGCATCCTCTCGTAGACAAGATTGCCTTTACTGGAAGCTCTATGACTGGGAGCAAGATTATGTCAACTGCAGCTCAACTGATCAAGCCTATTTCTCTGGAGCTTGGAGGAAAAAGCCCAATTGTTGTTTTTGAGGATGTTGACCTTGATAAAGCTGTTGAATGGACCATGTTTGGCTGTTTCTGGACAAATGGTCAGATTTGCGCTGCCACTACCCGTCTTATTATACATGAAAGCATAGCTGAACAATTTTTGAATAGGCTTGTGAAATGGATTAAAAACATCAAGATATCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGACCAGTTGTTAGTAAAGGACAGTATGAAAAAGTATTGAAGTTCATCTCAACTGCTGAGAGTGAGGGGGCAACAATTTTGACTGGTGGATCTCGCCCTAGGCATTTGAATAAGGGTTTTTTTGTTGAACCAACTGTCGTTACTGATGTAACTACCTCTATGGAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTCTGCGTGAAAACATTTAGTACTGAGGAAGAAGCTATTGAACTAGCAAATGACACCCAATATGGCTTAGCTGCTGCTGTGATATCAAATGATCTAGAAAGATGTGATCGCATAGCTAAGGCTTTTCAGGCGGGAATTGTATGGATCAATTGCTCCCAACCGTGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGTAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGGCTTGAAAACTACTTGAGTGTAAAGCAAGTAACTCAATATATATCAGATGAACCTTGGGGTTGGTACCAGTTTCCTTCAAAGCTGTGA 1641 0.443 MKKSRKREESNLSPQDLPIIPTELCCALHYTEREREREGSKVKMTITVPGRQLFIDGEWKEPIRKKRIPIINPSTELKIGDIPAATAEDVELAVAAARRALVRDKGKHWATASGFVRARYLRAIAAKIMERKSELGKLEALDCGKPLDEALWDMDDVAGCFEYYADLAEGLDAKQKAPISLPMQTFKSHVLREPIGVVALITPWNYPLLMAVWKVAPALAAGCTAILKPSELASVTSLELGQICRDVGLPPGVLNILTGLGPEAGAPMASHPLVDKIAFTGSSMTGSKIMSTAAQLIKPISLELGGKSPIVVFEDVDLDKAVEWTMFGCFWTNGQICAATTRLIIHESIAEQFLNRLVKWIKNIKISDPLEEGCRLGPVVSKGQYEKVLKFISTAESEGATILTGGSRPRHLNKGFFVEPTVVTDVTTSMEIWREEVFGPVLCVKTFSTEEEAIELANDTQYGLAAAVISNDLERCDRIAKAFQAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQFPSKL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0214 546 Pfam Aldehyde dehydrogenase family 64 528 IPR015590 GO:0016491
Mibi09g0214 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 526 IPR016162 GO:0016491
Mibi09g0214 546 CDD ALDH_F10_BADH 70 530 - -
Mibi09g0214 546 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 55 320 - -
Mibi09g0214 546 FunFam Betaine aldehyde dehydrogenase 306 497 - -
Mibi09g0214 546 SUPERFAMILY ALDH-like 44 529 IPR016161 GO:0016491
Mibi09g0214 546 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Mibi09g0214 546 PANTHER ALDEHYDE DEHYDROGENASE 47 545 - -
Mibi09g0214 546 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
Mibi09g0214 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 501 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0214 Mibi-ChrMibi09 2703223 2714825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0214 44 546 Aldehyde Dehydrogenase Gene Family AT3G48170 79.523 0.0 863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0214 09 2703223 2714825 Mibi13g0641 13 8361602 8365947 CCT
Mibi09g0214 09 2703223 2714825 Mibi09g0214 09 2703223 2714825 ECH