Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0212 ATGGCCTCTTCTGCTGCACTCCTAGATCCTTCCAGACACTACACCTATAATCGCAAGCAGAAATCTCTCGGCCTCTTGTGCACCAATTTCTTGAGCTTGTATAATCGCGATGGCGTTCACTTGATCGGCCTTGACGATGCGGCTGCGCGATTAGGGGTCGAGAGGCGGCGGATCTATGATATTGTTAATGTACTGGAGAGTGTTGGGGTGCTTGCAAGGAAAGCTAAGAATCAATATACTTGGAGAGGATTTGGGGCAATTCCAGGGGCCTTACAGGAGCTCAAAGATGAAGGTTTAAGGGAGAATTGTGATGCTTTTGATGGCAGTCAAGAAAATGCTAAAATGTCAGACGATGAGGATGATGAAGAAACAATGTCCAATCCCAGTACTGGAAGTCAGAATGACAAGTCTTGCCCTAATTCTTCTCTTCTCAAATCTATGAAGAATGATAACCGAAGGGAAAAGTCTCTGGCACTCCTCACTCAGAATTTTGTCAAGCTCTTTGTTTGCCATAATATGGAGTTGATTTCCCTCGATGAAGCTGCCAAGTTGTTGCTTGGAGATGCCCACAATACGTCAATAATGAGAACGAAAGTAAGACGTCTATATGATATTGCAAATGTGCTGTCCTCCATGAACCTTATTGAGAAGACTCATACATCAGATACAAGAAAACCTGCTTTTAGATGGCTGGGCTTGAAGGGGAAGGCAGACAATGAGTCTGTTCACAATTCAAATCCCAAGGAATCCAGGAAAAGGATATTTGGTAATGATATCACAAACATCAGTTTTAAGAGGAATAAAGTGGATTTATTTTCTGATGGGGACCCAAACCAGAATACTAAGATACTAAACAAAGTGGACTGTGATAGTTGGTCCGATCAGACAGATAAAAGCAATCAAAATCAGGACTCAAAGCAGGGTTCAAGGAGCTATCAGTTTGGCCCTTTCGCTCCTGCATTCGTGCCCAAAGTGAGTACCTCTGAGAATAATAATGCAAAGCGGGTCCATGATTGGGATAGTTTGGCAACTACTTATCGTCCACAGTATCAAAACCAAGCTCTGAAAGAACTCTTCAGTCATTACATGGAAGCATGGAAGTCATGGTACTCAGAAGTCGCAGGCAAGAGGCCCATCCGTAGTTTGTAA 1149 0.4326 MASSAALLDPSRHYTYNRKQKSLGLLCTNFLSLYNRDGVHLIGLDDAAARLGVERRRIYDIVNVLESVGVLARKAKNQYTWRGFGAIPGALQELKDEGLRENCDAFDGSQENAKMSDDEDDEETMSNPSTGSQNDKSCPNSSLLKSMKNDNRREKSLALLTQNFVKLFVCHNMELISLDEAAKLLLGDAHNTSIMRTKVRRLYDIANVLSSMNLIEKTHTSDTRKPAFRWLGLKGKADNESVHNSNPKESRKRIFGNDITNISFKRNKVDLFSDGDPNQNTKILNKVDCDSWSDQTDKSNQNQDSKQGSRSYQFGPFAPAFVPKVSTSENNNAKRVHDWDSLATTYRPQYQNQALKELFSHYMEAWKSWYSEVAGKRPIRSL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0212 382 Gene3D - 13 86 IPR036388 -
Mibi09g0212 382 Gene3D - 147 234 IPR036388 -
Mibi09g0212 382 SUPERFAMILY "Winged helix" DNA-binding domain 154 233 IPR036390 -
Mibi09g0212 382 MobiDBLite consensus disorder prediction 105 146 - -
Mibi09g0212 382 MobiDBLite consensus disorder prediction 292 312 - -
Mibi09g0212 382 Pfam E2F/DP family winged-helix DNA-binding domain 19 83 IPR003316 GO:0005667|GO:0006355
Mibi09g0212 382 Pfam E2F/DP family winged-helix DNA-binding domain 154 232 IPR003316 GO:0005667|GO:0006355
Mibi09g0212 382 MobiDBLite consensus disorder prediction 292 313 - -
Mibi09g0212 382 FunFam E2F transcription factor-like E2FE 147 234 - -
Mibi09g0212 382 MobiDBLite consensus disorder prediction 126 146 - -
Mibi09g0212 382 SUPERFAMILY "Winged helix" DNA-binding domain 17 81 IPR036390 -
Mibi09g0212 382 FunFam E2F transcription factor 8 13 85 - -
Mibi09g0212 382 SMART E2F_TDP_2 18 83 IPR003316 GO:0005667|GO:0006355
Mibi09g0212 382 SMART E2F_TDP_2 152 232 IPR003316 GO:0005667|GO:0006355
Mibi09g0212 382 PANTHER TRANSCRIPTION FACTOR E2F 13 351 IPR015633 GO:0000978|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0212 Mibi-ChrMibi09 2688124 2691140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0212 13 379 E2F-DP Transcription Factor Family AT3G48160 58.760 8.20e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mibi09g0212 E2F_TDP 1.5e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0212 09 2688124 2691140 Mibi09g0212 09 2688124 2691140 ECH