Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0167 ATGGAGTTTGCTTTAGGAAGATCTGATCATGAAAGTAGAGTCAAAGAAGAGAAGACGAGTGAATCTGCTGGCTATGGTGACGAAGATCATCGAAAACAAGAGATTGATGTTGAGGTGCCACCAGTGGGCGATACTTCTGGACCAATTGCATCTTCAACTAAACAGGAAGAGGTGGAGGAGCTAGAAAGTGCAAAAACGGAAATGGGAGAGGTGAGAGAAGAAAACCAAAGGCTGAAGCAGTGTTTGGATCGAGTTATGAAGGATTACAAAACACTTGAAATGCAATTCAGAGATATAGTTCAAAAAGAAACCAAAGAACCAATTACTTATGAGTGTGATGAGCTAGTTTCTCTGAGCCTTGGAAGAGTTATCCGCAGTAATGATAATAATGCAAGAAATAACGACGATCATCAGAAAAGCAAAGCTTTGAAAGCATTATTATTGAAGAAGGATGATGATGAAGGAGAAGAATTAGCTCTTGGATTGAAGTGCAAATTTGAAACATCAAAGTCATCATCAGGAACAAGCATAAATACTAATCATGATGAGGCTAATAATAACAATAATAATAATATGCCACATAGAATTAATAATGCAAGCCCTTCCAATAGTTCTCATCATGAAGAGGAGCTACCCATGAATAATGAAAGTAAGTCACTCAAAACAAGCAGAGATGGTTATTGTGGAGAAGACGAAGTTTCCGAACACAGTCCTGCTAAGAAAGCTAGGGTTTGTGTCAGGGCAAGATGCGATGCTCAAACTATGAATGATGGGTGCCAATGGAGGAAATATGGACAGAAAATCTCAAAGGGAAATCCTTGTCCTCGAGCCTATTATCGCTGTACAGTTGCGCCCTCATGCCCAGTCAAAAAACAGGTGCAAAGATGTGCTGAAGACATGTCAGTGTTAGTGACAACATATGAGGGAATGCACAACCACCCTCTTCCTCTCTCAGCCACCGCCATGGCTTCCACCACTTCTGCCGCAGCTTCCATGCTCCTGTCCGGTTCATCATCAACAACAACTTCTTCATCAGCCGATCTATATGGCCTGAATTTCTCCATATCAGACGGTTCTTCCATGATCAGATCATCATCATCATCATCATCATCAAAACCATTATTATACCATAATCTCCCCAATTATCATTCTTCTTCACTCACATCATCAATGCCTACTTCTCACCCAACAATCACTCTTGACCTCACCACAAACCCATTAGCCTCCACATTCATTACCTCTTCTTCTTCATCATCAACAAACTTCAACCAACCTCCTCCAAGATCATCATCATTATACCCTTCTTCTTCCACAAGTACTCTCAACTTTAGTGTCCCAAACAAGCATCATTTCCTCAGCCATAGCACTCAAAATAATAACAGGAACAATATTTTCAGCTCCATGAATCTTGCAAGGTCAACGACAATAATAGATAATGTATACAAAATGCCACCTTACCTGCAAAAGAACCCAACTTTGCCTCCCCGACCTCCTCCTCCTACTCAGCCGGCGGATAGTATCGCCGCAGCGACTAAGGCCATAACGGCGGATCCAAAGTTTCAGTCGGCTTTGGCGGTGGCGCTTACTTCTATCATTGGCACTGCAAGTGGCGGCGCTGCAGATAACTTGCCTCATCACAAAATGAAATGGGGAGAGCTTTTCCCAGCATTATGA 1674 0.4211 MEFALGRSDHESRVKEEKTSESAGYGDEDHRKQEIDVEVPPVGDTSGPIASSTKQEEVEELESAKTEMGEVREENQRLKQCLDRVMKDYKTLEMQFRDIVQKETKEPITYECDELVSLSLGRVIRSNDNNARNNDDHQKSKALKALLLKKDDDEGEELALGLKCKFETSKSSSGTSINTNHDEANNNNNNNMPHRINNASPSNSSHHEEELPMNNESKSLKTSRDGYCGEDEVSEHSPAKKARVCVRARCDAQTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVKKQVQRCAEDMSVLVTTYEGMHNHPLPLSATAMASTTSAAASMLLSGSSSTTTSSSADLYGLNFSISDGSSMIRSSSSSSSSKPLLYHNLPNYHSSSLTSSMPTSHPTITLDLTTNPLASTFITSSSSSSTNFNQPPPRSSSLYPSSSTSTLNFSVPNKHHFLSHSTQNNNRNNIFSSMNLARSTTIIDNVYKMPPYLQKNPTLPPRPPPPTQPADSIAAATKAITADPKFQSALAVALTSIIGTASGGAADNLPHHKMKWGELFPAL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0167 557 SMART WRKY_cls 255 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g0167 557 ProSiteProfiles WRKY domain profile. 250 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g0167 557 Gene3D WRKY domain 239 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi09g0167 557 MobiDBLite consensus disorder prediction 169 233 - -
Mibi09g0167 557 FunFam probable WRKY transcription factor 31 240 317 - -
Mibi09g0167 557 MobiDBLite consensus disorder prediction 1 57 - -
Mibi09g0167 557 SUPERFAMILY WRKY DNA-binding domain 248 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi09g0167 557 MobiDBLite consensus disorder prediction 169 208 - -
Mibi09g0167 557 Pfam WRKY DNA -binding domain 256 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi09g0167 557 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 42 535 IPR044810 GO:0003700
Mibi09g0167 557 Coils Coil 54 95 - -
Mibi09g0167 557 MobiDBLite consensus disorder prediction 413 439 - -
Mibi09g0167 557 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0167 Mibi-ChrMibi09 2183902 2187705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0167 60 533 WRKY Transcription Factor Family AT1G18860 37.595 2.92e-67 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi09g0167 WRKY 2.3e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0167 09 2183902 2187705 Mibi13g0687 13 8981404 8985800 ECH
Mibi09g0167 09 2183902 2187705 Mibi09g0167 09 2183902 2187705 ECH