LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi09g0162	ATGGGGAAGTCACCTGGAAAATGGATCAAAACAGTGCTATTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGCTAGAGAGAAACTTGTTAAACAGAAGGAAGAGCCGATTGCTTCCAAGGCATCAGAAACTGAGTTCTCTTTTGATCCAACTCCCATTACTTTTGCAAGAAATGAGAGGGATCCTGTTCTGGAAAATAGAGATCCAGAAAATCTTTTGGTGCAGAATGAAGCTGATATTGCAAGATCTGATCATCAAGATGCCCCTCCTAATCCGGATAGAATTATGCAGGAGGAAGTTGTAACAAAGGTGCAGGCTACTTTATCTCCTGATATAGAGAAAATTAAGCAGGAGGAAGATCCGATGAACATGCAGGCTACTTTACCTTTTGATCTAGACAAAATTAAGCAGGAGGAAGCTGTAATGAAGCTGCAAGCTACTTGCAGGGGTTATTTGGCTCGCAGGGCTTTCAGGACTGGTAAAGGCATAATAAGGTTGCAAGCACTCATCCGAGGGCACTTGGTTAGGAGACAAGCTATTTCTACTTTATGTTGCACGTATGGGATTATTAAGTTACAAGCACTTGTTCGTGGTCGAAGAGTTAGGCAGTCTGATGTTGGGTATGAAATGCATGGGAAGTGCAATCTTGTGAAGAATCAGGTTGCCAAGAGCAGCAACTCAGCTGGGTTAACTTCAAAAATATCAAATACGTCAGCAAATAAATTTATCCACAAGCTTCTTGCTTCATCAACTGGAACAACTGCTTTGTGTCTTCAATATGCTTCAGGGAATCCAAATGCAGTCCCAAGTTGGTTGGAGCGCTGGTCGACATCTCACTTTTGGAAACCAGTTCCCAAACCCAAGAAACTCATAGACTCTAAATCTCAGAGAAAGATGGGTAATAATTCAAATGGAGATGCTCAAATGAGCAAGCCAAAACGTAGTAACTGGAAGATTCCTTCTACAAGTTCAGACTTGGTCTTGGTGCGAGAGATTTCTGAATTTGAGAAACCAAAACGAAACCTGAGAAAAGCTTCAAGCAAGCCCACAGATTCAGTGCAGGAAAATTCAGAAAATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAGCCCTGCTATAGAGAATTCTGCTCAGTCAGAAGTTGAATCAGAGAGTGTGAAGCAGCATTCAGAAAAGGCATCAGTTACCTCAGGTTATAGTGTTTCAGAAGAAGAGGTCAAAACTTGTTCCAATGGGAAGACAAAAATGGATTCAACATTGGCCTTGTCCATTGAACCTGATGGAGAAGTTACACTTAGAATTTCAGTTAGCAAGGAGGCGCCTGACACGCCCAGTAGTCAAATGCCTATCAATTTGGTGCCCTTGAGAGAGACTACAAGTAGATGTAAAAACAATTCTGGTGAAGCTACCATAGAGCTAAAAGATTCTCACGAGAACTGTAATGACGAAAATTCTCCCCTATTGAATGGGCATTCAAGTCTAAAGGAAGATTCAACTAGAAATGAAAACCAGAAACCCGGTCGGAAGTCCCCAGTTCCAGCTAAGCAGGAACTTGTGGAGGATGGTTTACAGAATAGCCCAAGCCCCACTTTACCAAGTTATATGGCAGCTACTGAATCTGCTAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTGGGACAAGATAACGGAGATGAGAGAAGCAACCCTACCAGGCGACATTCTCTGCCATCTTCAAATAACAGTAAAATTAGTTCACATTCACCAAGAACACAGAGACCAGCTCAGGCAGGAGGCAAAGGGGGACACAAGAGTGACAGAACAATGGGTTATTCCAGAGGTGGCGGTAATGTTACACTATATTTCTTCTTAGATAAAGGGGATTGA	1881	0.4216	MGKSPGKWIKTVLFGKKSSKSNISKAREKLVKQKEEPIASKASETEFSFDPTPITFARNERDPVLENRDPENLLVQNEADIARSDHQDAPPNPDRIMQEEVVTKVQATLSPDIEKIKQEEDPMNMQATLPFDLDKIKQEEAVMKLQATCRGYLARRAFRTGKGIIRLQALIRGHLVRRQAISTLCCTYGIIKLQALVRGRRVRQSDVGYEMHGKCNLVKNQVAKSSNSAGLTSKISNTSANKFIHKLLASSTGTTALCLQYASGNPNAVPSWLERWSTSHFWKPVPKPKKLIDSKSQRKMGNNSNGDAQMSKPKRSNWKIPSTSSDLVLVREISEFEKPKRNLRKASSKPTDSVQENSENEFEKVKRNLRKVHSPAIENSAQSEVESESVKQHSEKASVTSGYSVSEEEVKTCSNGKTKMDSTLALSIEPDGEVTLRISVSKEAPDTPSSQMPINLVPLRETTSRCKNNSGEATIELKDSHENCNDENSPLLNGHSSLKEDSTRNENQKPGRKSPVPAKQELVEDGLQNSPSPTLPSYMAATESAKAKLRAQGSPRLGQDNGDERSNPTRRHSLPSSNNSKISSHSPRTQRPAQAGGKGGHKSDRTMGYSRGGGNVTLYFFLDKGD	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	287	321	-	-
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	442	626	-	-
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	356	373	-	-
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	34	68	-	-
	Mibi09g0162	626	ProSiteProfiles	IQ motif profile.	162	184	IPR000048	GO:0005515
	Mibi09g0162	626	Gene3D	-	137	180	-	-
	Mibi09g0162	626	Coils	Coil	16	36	-	-
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	571	591	-	-
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	525	539	-	-
	Mibi09g0162	626	SMART	iq_5	160	181	IPR000048	GO:0005515
	Mibi09g0162	626	SMART	iq_5	137	159	IPR000048	GO:0005515
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	340	403	-	-
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	442	471	-	-
	Mibi09g0162	626	MobiDBLite	consensus disorder prediction	297	321	-	-
	Mibi09g0162	626	Pfam	Protein of unknown function (DUF4005)	520	603	IPR025064	-
	Mibi09g0162	626	ProSiteProfiles	IQ motif profile.	138	166	IPR000048	GO:0005515
	Mibi09g0162	626	PANTHER	IQ-DOMAIN 5-RELATED	1	583	-	-
	Mibi09g0162	626	Pfam	IQ calmodulin-binding motif	140	159	IPR000048	GO:0005515
	Mibi09g0162	626	Pfam	IQ calmodulin-binding motif	162	179	IPR000048	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi09g0162	Mibi-ChrMibi09	2142878	2151289	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi09g0162	1	613	IQD Protein Family	AT1G74690	39.005	6.53e-101	317

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi09g0162	09	2142878	2151289	Mibi13g0692	13	9017988	9022435	ECH
	Mibi09g0162	09	2142878	2151289	Mibi09g0162	09	2142878	2151289	ECH