Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0146 ATGAAGAGGGGGACCATGGGGAGATGTGAAAGTGGAGGCAGATTGAGTGCTCTGCCTCCAGGCTTCTCTTATTCACTGATACTTACGTTTACTTGTTGTGTTGCCTTCTCAACTACAGAGTTTGTGTCGTACTTGAAGAATTGTGTAAAGGCATACCTTGCTTTTGTTACTTCTTTCATGGCATCAGAAACTCCCGCCCTGGCAGCCGAGGAAGTCAATGTGTTAGAAGGAACATCAAAAACCAGTTCTTCTCCTAGTAAAAAGAACCGAGGGAAAATTCCCAAAAGAATTCACAAGGCTGAGAGGGAGAAAATGAAGCGTGAGCATTTGAATGATCTCTTTCTTGATCTTGCCAATGCTCTTGAACTAGGTCAGCAAAACAATGGAAAGGCTTCCATATTGTCTGAAGCCACTAAGCTGCTAAGGGACCTGCTTGATCAGATTGAGAGCCTGAAGAAGGAGAATGTGTCTCTGCTCTCTGAATCACATTATGTTACCATAGAAAAGAATGAACTGGAGGAGGAAAACTCTGCTCTAGAAACACAAATCGATAAACTTCAAGGCGAGATAGAAGCAAGACTAGCACAATGTAAACCTGACCTAAATGGACCTCCTCCAATGGAAATTGAGCCACCAGAGCAAGCAGCAATTTTTCCTAGAGAGTGTCTCCAATTGCCTACTATTGATCCTACATTGCAACAAGGACCTGCTGTATTAGTTGTCCCCTTCCGTCCTCACCTTCAACCTTCTTTTCCCGCCCCCAACATGGCCGAGCTTGCCTCGAATCCCATTGTGAGTAAACCTCATGCCAGGTATCCCACCCCTGCAGACTCATGGCCATCACAGCTGCTTGGAGAGCAGCCAACATCAAACTAA 876 0.4521 MKRGTMGRCESGGRLSALPPGFSYSLILTFTCCVAFSTTEFVSYLKNCVKAYLAFVTSFMASETPALAAEEVNVLEGTSKTSSSPSKKNRGKIPKRIHKAEREKMKREHLNDLFLDLANALELGQQNNGKASILSEATKLLRDLLDQIESLKKENVSLLSESHYVTIEKNELEEENSALETQIDKLQGEIEARLAQCKPDLNGPPPMEIEPPEQAAIFPRECLQLPTIDPTLQQGPAVLVVPFRPHLQPSFPAPNMAELASNPIVSKPHARYPTPADSWPSQLLGEQPTSN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0146 291 Coils Coil 134 161 - -
Mibi09g0146 291 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 159 IPR036638 GO:0046983
Mibi09g0146 291 CDD bHLH_AtILR3_like 99 172 - -
Mibi09g0146 291 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 94 144 IPR011598 GO:0046983
Mibi09g0146 291 PANTHER TRANSCRIPTION FACTOR BHLH47 60 290 - -
Mibi09g0146 291 Coils Coil 169 196 - -
Mibi09g0146 291 MobiDBLite consensus disorder prediction 266 291 - -
Mibi09g0146 291 Gene3D - 92 167 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0146 60 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 48.178 4.34e-62 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0146 09 1933584 1935375 Mibi09g0146 09 1933584 1935375 ECH